BGSU RNA Site //

Equivalence class NR_3.0_73426.4 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
17EVO|1|H (rep)U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004The cryo-EM structure of the human 17S U2 snRNPElectron microscopy2.52022-08-03
28HK1|1|HU2 snRNAHomo sapiensEukaryaThe cryo-EM structure of human pre-17S U2 snRNPElectron microscopy2.72023-03-08
37Q4O|1|2+ 7Q4O|1|hU2 splicesomal small nuclear RNAU2 snRNA, BPS oligoHomo sapiensEukarya + SyntheticRF00004Substrate-bound A-like U2 snRNPElectron microscopy2.22022-03-30
47Q3L|1|2U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004Human 17S U2 snRNP 5' domainElectron microscopy2.32022-03-30
57Q4P|1|2U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004U2 snRNP after ATP-dependent remodelling snRNPElectron microscopy2.22022-03-30

Release history

Release3.2733.2743.2753.2763.2773.2783.279
Date2023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_73426.4NR_3.0_73426.33.273(4) 7Q4P|1|2, 7Q4O|1|2+7Q4O|1|h, 7Q3L|1|2, 7EVO|1|H(1) 8HK1|1|H(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17Q3L|1|2Human 17S U2 snRNP 5' domainELECTRON MICROSCOPY2.341
28HK1|1|HThe cryo-EM structure of human pre-17S U2 snRNPELECTRON MICROSCOPY2.7148
37EVO|1|HThe cryo-EM structure of the human 17S U2 snRNPELECTRON MICROSCOPY2.5148
47Q4O|1|2+7Q4O|1|hSubstrate-bound A-like U2 snRNPELECTRON MICROSCOPY2.224
57Q4P|1|2U2 snRNP after ATP-dependent remodelling snRNPELECTRON MICROSCOPY2.231