Equivalence class NR_3.5_30457.13 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7B9V|1|5 (rep) | U5 spliceosomal RNA | U5 snRNA, 5' exon of UBC4 mRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Yeast C complex spliceosome at 2.8 Angstrom resolution with Prp18/Slu7 bound | Electron microscopy | 2.8 | 2021-03-10 |
| 2 | 6J6G|1|D | U5 spliceosomal RNA | U5 snRNA, ACT1 pre-mRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom | Electron microscopy | 3.2 | 2019-04-24 |
| 3 | 6BK8|1|5 | U5 spliceosomal RNA | U5 snRNA, RNA (34-MER) | Saccharomyces cerevisiae | Eukarya | RF00020 | S. cerevisiae spliceosomal post-catalytic P complex | Electron microscopy | 3.3 | 2018-02-21 |
| 4 | 5GMK|1|D | U5 spliceosomal RNA | U5 snRNA, 5'-Exon | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | Electron microscopy | 3.4 | 2016-08-17 |
| 5 | 5Y88|1|B | U5 spliceosomal RNA | U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | Electron microscopy | 3.46 | 2018-08-01 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5Y88|1|B | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | ELECTRON MICROSCOPY | 3.46 | 117 |
| 2 | 5GMK|1|D | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | ELECTRON MICROSCOPY | 3.4 | 117 |
| 3 | 6BK8|1|5 | S. cerevisiae spliceosomal post-catalytic P complex | ELECTRON MICROSCOPY | 3.3 | 103 |
| 4 | 6J6G|1|D | Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom | ELECTRON MICROSCOPY | 3.2 | 179 |
| 5 | 7B9V|1|5 | Yeast C complex spliceosome at 2.8 Angstrom resolution with Prp18/Slu7 bound | ELECTRON MICROSCOPY | 2.8 | 178 |