#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15AY2|1|A+ 5AY2|1|B (rep)RNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*AP*CP*UP*CP*C)-3')synthetic constructCrystal structure of RNA duplex containing C-Ag(I)-C base pairsX-ray diffraction1.32015-10-21
25AY3|1|A+ 5AY3|1|BRNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*A*CP*UP*CP*C)-3')synthetic constructCrystal structure of RNA duplex containing C-C base pairsX-ray diffraction1.22015-10-21
35AY2|1|C+ 5AY2|1|DRNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*AP*CP*UP*CP*C)-3')synthetic constructCrystal structure of RNA duplex containing C-Ag(I)-C base pairsX-ray diffraction1.32015-10-21
45AY4|1|A+ 5AY4|1|BRNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*AP*CP*UP*CP*C)-3')synthetic constructCrystal structure of RNA duplex containing C-C base pairs obtained in the presence of Hg(II)X-ray diffraction1.72015-10-21
57EDU|1|A+ 7EDU|1|BRNA (5'-R(*GP*GP*AP*CP*UP*CP*GP*AP*CP*UP*CP*C)-3')synthetic constructRNA duplex containing C-Au-C base pairX-ray diffraction2.32022-03-23
67EDU|1|C+ 7EDU|1|DRNA (5'-R(*GP*GP*AP*CP*UP*CP*GP*AP*CP*UP*CP*C)-3')synthetic constructRNA duplex containing C-Au-C base pairX-ray diffraction2.32022-03-23

Release history

Release3.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.3603.3613.362
Date2022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-062024-11-132024-11-20

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_49464.2NR_3.5_49464.13.223(4) 5AY2|1|A+5AY2|1|B, 5AY2|1|C+5AY2|1|D, 5AY3|1|A+5AY3|1|B, 5AY4|1|A+5AY4|1|B(2) 7EDU|1|A+7EDU|1|B, 7EDU|1|C+7EDU|1|D(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17EDU|1|A+ 7EDU|1|BRNA duplex containing C-Au-C base pairX-RAY DIFFRACTION2.312
27EDU|1|C+ 7EDU|1|DRNA duplex containing C-Au-C base pairX-RAY DIFFRACTION2.312
35AY2|1|A+ 5AY2|1|BCrystal structure of RNA duplex containing C-Ag(I)-C base pairsX-RAY DIFFRACTION1.311
45AY2|1|C+ 5AY2|1|DCrystal structure of RNA duplex containing C-Ag(I)-C base pairsX-RAY DIFFRACTION1.311
55AY4|1|A+ 5AY4|1|BCrystal structure of RNA duplex containing C-C base pairs obtained in the presence of Hg(II)X-RAY DIFFRACTION1.711
65AY3|1|A+ 5AY3|1|BCrystal structure of RNA duplex containing C-C base pairsX-RAY DIFFRACTION1.212

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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