Equivalence class NR_3.5_94066.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6HA1|1|a (rep) | Small subunit ribosomal RNA | 16S ribosomal RNA | Bacillus subtilis | Bacteria | RF00177 | Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin | Electron microscopy | 3.1 | 2018-08-29 |
| 2 | 7O5B|1|A | Small subunit ribosomal RNA | 16S rRNA (1533-MER) | Bacillus subtilis subsp. subtilis str. 168 | Bacteria | RF00177 | Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound | Electron microscopy | 3.33 | 2022-02-02 |
| 3 | 6HA8|1|a | Small subunit ribosomal RNA | 16S rRNA | Bacillus subtilis | Bacteria | RF00177 | Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome | Electron microscopy | 3.5 | 2018-08-29 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_94066.3 | NR_3.5_94066.2 | 3.216 | (2) 6HA8|1|a, 6HA1|1|a | (1) 7O5B|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6HA8|1|a | Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome | ELECTRON MICROSCOPY | 3.5 | 1533 |
| 2 | 6HA1|1|a | Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin | ELECTRON MICROSCOPY | 3.1 | 1533 |
| 3 | 7O5B|1|A | Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound | ELECTRON MICROSCOPY | 3.33 | 1533 |