#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|DB (rep)5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
25JC9|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
35J8A|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
44YBB|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
56I7V|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
64WOI|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
75IT8|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
85J91|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
94U27|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
105J88|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
114WF1|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
124WOI|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
134V9D|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
144V9P|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
154V9P|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
164U24|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
174V9O|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
184WWW|1|RB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
194U26|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
204V9P|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
214V7T|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
224V9O|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
234V6C|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
244U25|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
254V9O|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
264V9P|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
274U1U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
284V7U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
294U20|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
304V7V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
314V9C|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
324U1V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
334V52|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
345J7L|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
354V52|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
364V7S|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
375J8A|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
384V9D|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
394V50|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
405JC9|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
414V85|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
426BY1|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli pH03H9 complexX-ray diffraction3.942019-02-27
436I7V|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
444V57|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
454V64|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
464V64|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
474V57|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
484V6D|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
494V54|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
504V54|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
514V53|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
524V53|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
534V6E|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
544V9O|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
554U27|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
564V56|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
574V55|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
584WF1|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
595J88|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
604U25|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
616BY1|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli pH03H9 complexX-ray diffraction3.942019-02-27
624V4Q|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
634U1V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
644V55|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
654V50|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
664V56|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
674V89|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.72014-07-09
684V4Q|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
694YBB|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
704U26|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
714U1U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
724V9C|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
734V7T|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
744U20|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
755IT8|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
764U24|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
774WWW|1|YB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
785J91|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
794V6C|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
804V6D|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
814V7V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
824V7S|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
834V7U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
844V6E|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
854V5B|1|CA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
864V5B|1|AA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
875J5B|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
884V4H|1|BA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
894V4H|1|DA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
905J5B|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
915AFI|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000012.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
926ORE|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release complex 70SElectron microscopy2.92019-06-19
935NWY|1|O5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF000012.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.92017-07-19
945MDV|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
955H5U|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
966HRM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S d2d8 stapled ribosomeElectron microscopy2.962018-12-19
976H4N|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
986QUL|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy32019-04-10
995WFS|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
1005MDZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
1016ENU|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.12017-11-22
1025MDW|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
1035MGP|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.12016-12-14
1046ENF|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.22017-11-22
1055U9G|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
1065U9F|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
1075UYM|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
1086C4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
1095WDT|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
1105WE4|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
1114V80|1|BB5S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.32014-07-09
1124V80|1|DB5S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.32014-07-09
1133JBV|1|a5S ribosomal RNARNA (118-MER)Escherichia coliBacteriaRF00001Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
1145GAE|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
1156I0Y|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.22018-12-05
1165MDY|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
1175WFK|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
1185LZD|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
1193JCE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
1205O2R|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.42017-07-26
1215LZE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
1226BU8|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
1236OSQ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.52019-06-26
1245U4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
1256ORL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.52019-06-19
1265KCR|1|1B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.62016-08-17
1275LZA|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.62016-11-23
1285UYL|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.62017-06-14
1295WE6|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
1305IQR|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
1315WF0|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.62018-05-02
1326ENJ|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)Electron microscopy3.72017-11-22
1333JBU|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.642016-01-27
1345L3P|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.72016-07-20
1355GAD|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC-SRP-SR complex early stateElectron microscopy3.72016-01-27
1366OSK|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 accommodated 70S complex at 60 msElectron microscopy3.62019-06-26
1373J9Z|1|LB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
1386Q9A|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeElectron microscopy3.72019-04-17
1396DNC|1|C5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.72018-07-04
1405JU8|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.62016-07-20
1415JTE|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.62016-07-20
1423JCJ|1|05S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
1435UYQ|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.82017-06-07
1445GAH|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with SRP with detached NG domainElectron microscopy3.82016-01-27
1456GWT|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.82018-08-15
1466GXM|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.82018-08-22
1476GBZ|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000150S ribosomal subunit assembly intermediate state 5Electron microscopy3.82018-06-20
1486OUO|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF2 accommodated state bound 70S complex at long incubation timeElectron microscopy3.72019-06-19
1496GC8|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000150S ribosomal subunit assembly intermediate - 50S rec*Electron microscopy3.82018-06-20
1505GAG|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with SRP-SR in the closed stateElectron microscopy3.82016-01-27
1515UYP|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.92017-06-07
1526GC0|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000150S ribosomal subunit assembly intermediate state 4Electron microscopy3.82018-06-20
1533J9Y|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
1545KPW|1|285S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.92016-09-28
1555UYK|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.92017-06-07
1565KPX|1|285S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.92016-09-28
1576GXO|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.92018-08-15
1586GXN|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.92018-08-15
1593JCD|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.72016-01-13
1605KPS|1|295S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.92016-09-28
1615KCS|1|1B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.92016-08-17
1625UYN|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy42017-06-07
1636OT3|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF2 accommodated state bound Release complex 70S at 24 msElectron microscopy3.92019-06-19
1646Q97|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeElectron microscopy3.92019-03-13
1654UY8|1|B5S ribosomal RNARRNA-5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeElectron microscopy3.82014-10-29
1665NP6|1|Z5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S structure prior to bypassingElectron microscopy3.62017-06-14
1676O9J|1|A5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S Elongation Competent RibosomeElectron microscopy3.92019-05-29
1686O9K|1|X5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S initiation complexElectron microscopy42019-05-29
1693J7Z|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.92014-10-22
1703JA1|1|LB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01

Release history

Release3.803.813.823.833.843.853.863.873.883.893.903.91
Date2019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-11

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_10157.49NR_4.0_10157.483.80(168) 3J7Z|1|B, 3J9Y|1|B, 3J9Z|1|LB, 3JA1|1|LB, 3JBU|1|a, 3JBV|1|a, 3JCD|1|B, 3JCE|1|B, 3JCJ|1|0, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4UY8|1|B, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V53|1|BA, 4V53|1|DA, 4V54|1|BA, 4V54|1|DA, 4V55|1|BA, 4V55|1|DA, 4V56|1|BA, 4V56|1|DA, 4V57|1|BA, 4V57|1|DA, 4V5B|1|AA, 4V5B|1|CA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V6D|1|BB, 4V6D|1|DB, 4V6E|1|BB, 4V6E|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V80|1|BB, 4V80|1|DB, 4V85|1|BB, 4V89|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAD|1|B, 5GAE|1|B, 5GAG|1|B, 5GAH|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5JTE|1|BB, 5JU8|1|BB, 5KCR|1|1B, 5KCS|1|1B, 5KPS|1|29, 5KPW|1|28, 5KPX|1|28, 5L3P|1|B, 5LZA|1|B, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NP6|1|Z, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYK|1|02, 5UYL|1|02, 5UYM|1|02, 5UYN|1|02, 5UYP|1|02, 5UYQ|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WF0|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6BY1|1|CB, 6BY1|1|DB, 6C4I|1|B, 6DNC|1|C, 6ENF|1|B, 6ENJ|1|B, 6ENU|1|B, 6GBZ|1|B, 6GC0|1|B, 6GC8|1|B, 6GWT|1|B, 6GXM|1|B, 6GXN|1|B, 6GXO|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6O9J|1|A, 6O9K|1|X, 6ORE|1|3, 6ORL|1|3, 6OT3|1|3, 6OUO|1|3, 6Q97|1|3, 6Q9A|1|3, 6QUL|1|B(2) 6OSK|1|3, 6OSQ|1|3(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_10157.49NR_4.0_10157.503.92(170) 3J7Z|1|B, 3J9Y|1|B, 3J9Z|1|LB, 3JA1|1|LB, 3JBU|1|a, 3JBV|1|a, 3JCD|1|B, 3JCE|1|B, 3JCJ|1|0, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4UY8|1|B, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V53|1|BA, 4V53|1|DA, 4V54|1|BA, 4V54|1|DA, 4V55|1|BA, 4V55|1|DA, 4V56|1|BA, 4V56|1|DA, 4V57|1|BA, 4V57|1|DA, 4V5B|1|AA, 4V5B|1|CA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V6D|1|BB, 4V6D|1|DB, 4V6E|1|BB, 4V6E|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V80|1|BB, 4V80|1|DB, 4V85|1|BB, 4V89|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAD|1|B, 5GAE|1|B, 5GAG|1|B, 5GAH|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5JTE|1|BB, 5JU8|1|BB, 5KCR|1|1B, 5KCS|1|1B, 5KPS|1|29, 5KPW|1|28, 5KPX|1|28, 5L3P|1|B, 5LZA|1|B, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NP6|1|Z, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYK|1|02, 5UYL|1|02, 5UYM|1|02, 5UYN|1|02, 5UYP|1|02, 5UYQ|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WF0|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6BY1|1|CB, 6BY1|1|DB, 6C4I|1|B, 6DNC|1|C, 6ENF|1|B, 6ENJ|1|B, 6ENU|1|B, 6GBZ|1|B, 6GC0|1|B, 6GC8|1|B, 6GWT|1|B, 6GXM|1|B, 6GXN|1|B, 6GXO|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6O9J|1|A, 6O9K|1|X, 6ORE|1|3, 6ORL|1|3, 6OSK|1|3, 6OSQ|1|3, 6OT3|1|3, 6OUO|1|3, 6Q97|1|3, 6Q9A|1|3, 6QUL|1|B(0) (1) 6U48|1|CB

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well.

#SPDBTitleMethodResolutionLength
1
6Q97|1|3
Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.9120
2
6BY1|1|DB
E. coli pH03H9 complexX-RAY DIFFRACTION3.94118
3
5NP6|1|Z
70S structure prior to bypassingELECTRON MICROSCOPY3.6120
4
6O9K|1|X
70S initiation complexELECTRON MICROSCOPY4118
5
6ORL|1|3
RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.5120
6
5GAE|1|B
RNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.33120
7
5U4I|1|B
Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.5118
8
6BY1|1|CB
E. coli pH03H9 complexX-RAY DIFFRACTION3.94118
9
6OSQ|1|3
RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.5120
10
6OSK|1|3
RF1 accommodated 70S complex at 60 msELECTRON MICROSCOPY3.6120
11
6OT3|1|3
RF2 accommodated state bound Release complex 70S at 24 msELECTRON MICROSCOPY3.9120
12
6OUO|1|3
RF2 accommodated state bound 70S complex at long incubation timeELECTRON MICROSCOPY3.7120
13
6HRM|1|3
E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.96120
14
3JCD|1|B
Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.7118
15
3JCE|1|B
Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.2118
16
5H5U|1|B
Mechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.01120
17
5GAD|1|B
RNC-SRP-SR complex early stateELECTRON MICROSCOPY3.7120
18
5GAH|1|B
RNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.8120
19
5GAG|1|B
RNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.8120
20
6QUL|1|B
Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY3120
21
5LZD|1|B
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.4120
22
6ENF|1|B
Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.2120
23
6ENJ|1|B
Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.7120
24
6ENU|1|B
Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.1120
25
5WFS|1|B
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY3120
26
5WE4|1|B
70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.1120
27
5WDT|1|B
70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY3120
28
5WF0|1|B
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.6120
29
5WFK|1|B
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.4120
30
5WE6|1|B
70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.4120
31
5O2R|1|B
Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.4120
32
6GXO|1|B
Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.9120
33
6GWT|1|B
Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.8120
34
6GXM|1|B
Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.8120
35
6GXN|1|B
Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.9120
36
5L3P|1|B
Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.7120
37
5KCS|1|1B
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.9120
38
5AFI|1|B
2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.9120
39
3J9Y|1|B
Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.9120
40
5UYQ|1|02
70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.8120
41
5UYN|1|02
70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY4120
42
5UYP|1|02
70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.9120
43
5UYK|1|02
70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.9120
44
5UYL|1|02
70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.6120
45
5UYM|1|02
70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.2120
46
6BU8|1|02
70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.5120
47
5U9G|1|02
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.2119
48
5U9F|1|02
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.2119
49
6DNC|1|C
E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.7120
50
5LZA|1|B
Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.6120
51
5LZE|1|B
Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.5120
52
6H4N|1|B
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY3120
53
5MGP|1|B
Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.1120
54
5KPW|1|28
Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.9120
55
5KPS|1|29
Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.9120
56
5KPX|1|28
Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.9120
57
5IQR|1|3
Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY3118
58
6C4I|1|B
Conformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.24120
59
5MDV|1|3
Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.97120
60
5MDZ|1|3
Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.1120
61
5MDW|1|3
Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.06120
62
5MDY|1|3
Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.35120
63
5NWY|1|O
2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.9118
64
6ORE|1|3
Release complex 70SELECTRON MICROSCOPY2.9120
65
4V9P|1|EB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
66
4V9O|1|EB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
67
4YBB|1|CB
High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1118
68
5JC9|1|CB
Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03118
69
5J5B|1|CB
Structure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8118
70
5J91|1|CB
Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96118
71
5J7L|1|CB
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3118
72
5J8A|1|CB
Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1118
73
5IT8|1|CB
High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12118
74
5J88|1|CB
Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32118
75
5JU8|1|BB
Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.6118
76
5JTE|1|BB
Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.6118
77
3JCJ|1|0
Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.7118
78
6GC8|1|B
50S ribosomal subunit assembly intermediate - 50S rec*ELECTRON MICROSCOPY3.8119
79
6GBZ|1|B
50S ribosomal subunit assembly intermediate state 5ELECTRON MICROSCOPY3.8119
80
6GC0|1|B
50S ribosomal subunit assembly intermediate state 4ELECTRON MICROSCOPY3.8119
81
4V85|1|BB
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.2118
82
4V89|1|BB
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.7118
83
6I7V|1|DB
Ribosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9119
84
5JC9|1|DB
Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03120
85
5J7L|1|DB
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3120
86
5J8A|1|DB
Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1120
87
5J91|1|DB
Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96120
88
5J5B|1|DB
Structure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8120
89
4YBB|1|DB
High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1120
90
5KCR|1|1B
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.6120
91
5IT8|1|DB
High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12120
92
5J88|1|DB
Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32120
93
4V6D|1|BB
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.81118
94
4V6E|1|BB
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.71118
95
4V7U|1|BB
Crystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1118
96
4V7V|1|BB
Crystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29118
97
4V7T|1|BB
Crystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19118
98
4V6C|1|BB
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19118
99
4V7S|1|BB
Crystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25118
100
4V80|1|BB
Crystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.3118
101
4WWW|1|RB
Crystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1118
102
4U1V|1|BB
Crystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3119
103
4U20|1|BB
Crystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9119
104
4U1U|1|BB
Crystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95119
105
4WF1|1|BB
Crystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09119
106
4U27|1|BB
Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8119
107
4U25|1|BB
Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9119
108
4U24|1|BB
Crystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9119
109
4U26|1|BB
Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8119
110
4V9D|1|CB
Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3119
111
4V9C|1|DB
Allosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3119
112
4WOI|1|BB
4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3119
113
6I0Y|1|B
TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.2118
114
4UY8|1|B
Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.8118
115
4V9O|1|AB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
116
3J7Z|1|B
Structure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.9118
117
4V9O|1|CB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
118
4V9P|1|CB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
119
4V9P|1|AB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
120
4WOI|1|CB
4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3118
121
4V9C|1|BB
Allosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3118
122
4V9D|1|DB
Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3118
123
4WF1|1|DB
Crystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09118
124
4U1U|1|DB
Crystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95118
125
4U20|1|DB
Crystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9118
126
4U1V|1|DB
Crystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3118
127
4U27|1|DB
Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8118
128
4U25|1|DB
Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9118
129
4U26|1|DB
Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8118
130
4U24|1|DB
Crystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9118
131
6I7V|1|CB
Ribosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9118
132
4V80|1|DB
Crystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.3117
133
4WWW|1|YB
Crystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1117
134
4V7S|1|DB
Crystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25117
135
4V6C|1|DB
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19117
136
4V7T|1|DB
Crystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19117
137
4V7V|1|DB
Crystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29117
138
4V7U|1|DB
Crystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1117
139
4V6E|1|DB
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.71117
140
4V6D|1|DB
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.81117
141
6Q9A|1|3
Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeELECTRON MICROSCOPY3.7120
142
4V9P|1|GB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
143
4V9O|1|GB
Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
144
3J9Z|1|LB
Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.6120
145
3JA1|1|LB
Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.6120
146
4V50|1|DA
Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
147
4V50|1|BA
Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
148
4V54|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
149
4V57|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
150
4V52|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
151
4V64|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
152
4V55|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4117
153
4V53|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.54117
154
4V54|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
155
4V55|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4117
156
4V53|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.54117
157
4V64|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
158
4V52|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
159
4V57|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
160
4V56|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.93117
161
4V56|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.93117
162
4V4H|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
163
4V4Q|1|BA
Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
164
6O9J|1|A
70S Elongation Competent RibosomeELECTRON MICROSCOPY3.9117
165
4V5B|1|AA
Structure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.74117
166
4V5B|1|CA
Structure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.74117
167
4V4Q|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
168
4V4H|1|DA
Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
169
3JBV|1|a
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.32117
170
3JBU|1|a
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.64118

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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