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Equivalence class NR_4.0_21055.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14WRT|1|V+ 4WRT|1|R (rep)Influenza virus polymerase vRNA promoter 5' end, Influenza virus polymerase vRNA promoter 3' endInfluenza B virusCrystal structure of Influenza B polymerase with bound vRNA promoter (form FluB2)X-ray diffraction2.72014-11-19
27Z43|1|VVV+ 7Z43|1|RRRRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*CP*CP*UP*GP*CP*U)-3')Influenza B virusInfluenza B polymerase with Pol II pSer5 CTD peptide mimic bound in site 1B and 2BX-ray diffraction3.1232022-05-11
34WSA|1|V+ 4WSA|1|RInfluenza B vRNA promoter 5' end, Influenza B vRNA promoter 3' endInfluenza B virusCrystal structure of Influenza B polymerase bound to the vRNA promoter (FluB1 form)X-ray diffraction3.42014-11-19
45M3J|1|V+ 5M3J|1|RRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*C)-3')Influenza B virusInfluenza B polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTDX-ray diffraction3.52016-12-21
55MSG|1|V+ 5MSG|1|RRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*CP*UP*GP*CP*U)-3')Influenza B virusInfluenza B polymerase bound to vRNA promoter and capped RNA primerX-ray diffraction3.82017-02-08
66T0N|1|V+ 6T0N|1|R5' vRNA, 3' vRNAInfluenza B virusBat Influenza A polymerase pre-initiation complexElectron microscopy2.542020-04-15
76SZV|1|V5' vRNAInfluenza B virusBat Influenza A polymerase elongation complex with incoming UTP analogue (core + endonuclease only)Electron microscopy2.52020-04-15
86QCS|1|V+ 6QCS|1|R5 end, 3 endInfluenza B virusInfluenza B polymerase pre-initiation complexElectron microscopy3.12019-06-05
97R1F|1|V5' vRNAInfluenza B virusEarly transcription elongation state of influenza B polymerase backtracked due to double incoproation of nucleotide analogue T1106Electron microscopy2.582022-12-28
106QCT|1|V5 endInfluenza B virusInfluenza B polymerase elongation complexElectron microscopy3.22019-06-05

Release history

Release3.3333.3343.3353.3363.3373.3383.3393.340
Date2024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-19

Parents

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Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16T0N|1|V+6T0N|1|RBat Influenza A polymerase pre-initiation complexELECTRON MICROSCOPY2.5414
24WRT|1|V+4WRT|1|RCrystal structure of Influenza B polymerase with bound vRNA promoter (form FluB2)X-RAY DIFFRACTION2.714
36QCS|1|V+6QCS|1|RInfluenza B polymerase pre-initiation complexELECTRON MICROSCOPY3.114
44WSA|1|V+4WSA|1|RCrystal structure of Influenza B polymerase bound to the vRNA promoter (FluB1 form)X-RAY DIFFRACTION3.414
55M3J|1|V+5M3J|1|RInfluenza B polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTDX-RAY DIFFRACTION3.514
67Z43|1|VVV+7Z43|1|RRRInfluenza B polymerase with Pol II pSer5 CTD peptide mimic bound in site 1B and 2BX-RAY DIFFRACTION3.12314
75MSG|1|V+5MSG|1|RInfluenza B polymerase bound to vRNA promoter and capped RNA primerX-RAY DIFFRACTION3.814
87R1F|1|VEarly transcription elongation state of influenza B polymerase backtracked due to double incoproation of nucleotide analogue T1106ELECTRON MICROSCOPY2.5812
96QCT|1|VInfluenza B polymerase elongation complexELECTRON MICROSCOPY3.213
106SZV|1|VBat Influenza A polymerase elongation complex with incoming UTP analogue (core + endonuclease only)ELECTRON MICROSCOPY2.514
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