Equivalence class NR_4.0_25735.1 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 1PJG|1|A (rep) | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | RNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTG | X-RAY DIFFRACTION | 1.15 | 2003-12-09 | |
| 2 | 1PJO|1|A | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | Crystal Structure of an RNA/DNA hybrid of HIV-1 PPT | X-RAY DIFFRACTION | 1.1 | 2003-12-09 | |
| 3 | 1G4Q|1|A | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTG | X-RAY DIFFRACTION | 1.15 | 2003-07-08 | |
| 4 | 7OOO|1|A | RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3') | synthetic construct | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG containing an LNA-Amide-LNA modification | X-RAY DIFFRACTION | 2.57 | 2022-08-03 |
| 5 | 7OOO|1|D | RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3') | synthetic construct | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG containing an LNA-Amide-LNA modification | X-RAY DIFFRACTION | 2.57 | 2022-08-03 |
| 6 | 1JB8|1|A | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | The Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular Intercalation | X-RAY DIFFRACTION | 2.38 | 2003-07-01 | |
| 7 | 7NRP|1|A | RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3') | synthetic construct | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG | X-RAY DIFFRACTION | 2.67 | 2022-06-22 |
| 8 | 7OOS|1|A | RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3') | synthetic construct | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG | X-RAY DIFFRACTION | 2.6 | 2022-08-03 |
| 9 | 7OZZ|1|A | RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3') | synthetic construct | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification | X-RAY DIFFRACTION | 2.7 | 2022-08-03 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7OOS|1|A | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG | X-RAY DIFFRACTION | 2.6 | 10 |
| 2 | 7NRP|1|A | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG | X-RAY DIFFRACTION | 2.67 | 10 |
| 3 | 7OZZ|1|A | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification | X-RAY DIFFRACTION | 2.7 | 10 |
| 4 | 7OOO|1|A | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG containing an LNA-Amide-LNA modification | X-RAY DIFFRACTION | 2.57 | 10 |
| 5 | 7OOO|1|D | The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG containing an LNA-Amide-LNA modification | X-RAY DIFFRACTION | 2.57 | 10 |
| 6 | 1PJO|1|A | Crystal Structure of an RNA/DNA hybrid of HIV-1 PPT | X-RAY DIFFRACTION | 1.1 | 14 |
| 7 | 1G4Q|1|A | RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTG | X-RAY DIFFRACTION | 1.15 | 10 |
| 8 | 1PJG|1|A | RNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTG | X-RAY DIFFRACTION | 1.15 | 14 |
| 9 | 1JB8|1|A | The Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular Intercalation | X-RAY DIFFRACTION | 2.38 | 10 |