Equivalence class NR_4.0_28207.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6OLE|1|v (rep) | Transfer RNA | PE RNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs | Electron microscopy | 3.1 | 2019-06-19 |
| 2 | 6OM0|1|v | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs | Electron microscopy | 3.1 | 2019-06-19 |
| 3 | 6OLI|1|v | Transfer RNA | tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC) | Electron microscopy | 3.5 | 2019-06-19 |
| 4 | 6OM7|1|v | Transfer RNA | A/A site tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs | Electron microscopy | 3.7 | 2019-06-19 |
| 5 | 6W6L|1|v | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the human ribosome-TMCO1 translocon | Electron microscopy | 3.84 | 2020-09-02 |
| 6 | 3J73|1|S6 | P/E tRNA, Messenger RNA | Structure of the translating mammalian ribosome-Sec61 complex | Electron microscopy | 3.9 | 2014-06-18 | ||||
| 7 | 1VX2|1|6 | P/E tRNA, Messenger RNA | Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit. | Electron microscopy | 3.9 | 2014-06-18 | ||||
| 8 | 6OLF|1|v | Transfer RNA | AA tRNA, mRNA | Homo sapiens | Eukarya | RF00005 | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs | Electron microscopy | 3.9 | 2019-06-19 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6W6L|1|v | Cryo-EM structure of the human ribosome-TMCO1 translocon | ELECTRON MICROSCOPY | 3.84 | 76 |
| 2 | 6OM0|1|v | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs | ELECTRON MICROSCOPY | 3.1 | 76 |
| 3 | 6OLI|1|v | Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC) | ELECTRON MICROSCOPY | 3.5 | 76 |
| 4 | 6OLE|1|v | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs | ELECTRON MICROSCOPY | 3.1 | 76 |
| 5 | 6OM7|1|v | Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs | ELECTRON MICROSCOPY | 3.7 | 76 |
| 6 | 6OLF|1|v | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs | ELECTRON MICROSCOPY | 3.9 | 76 |
| 7 | 3J73|1|S6 | Structure of the translating mammalian ribosome-Sec61 complex | ELECTRON MICROSCOPY | 3.9 | 76 |
| 8 | 1VX2|1|6 | Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit. | ELECTRON MICROSCOPY | 3.9 | 76 |