#PDBTitleRNA source organismCompoundsMethodResolutionDate
11QRS|1|B (rep)GLUTAMINYL-TRNA SYNTHETASE MUTANT D235N COMPLEXED WITH GLUTAMINE TRANSFER RNAEscherichia coliPROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)), TRNAGLN2X-RAY DIFFRACTION2.61996-12-07
21O0C|1|BCRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASEGlutaminyl-tRNA synthetase, Glutaminyl tRNAX-RAY DIFFRACTION2.72003-04-15
31QTQ|1|BGLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA AND AN AMINO ACID ANALOGEscherichia coliPROTEIN (GLUTAMINYL-TRNA SYNTHETASE), RNA (TRNA GLN II )X-RAY DIFFRACTION2.251998-05-27
41QRT|1|BGLUTAMINYL-TRNA SYNTHETASE MUTANT D235G COMPLEXED WITH GLUTAMINE TRANSFER RNAEscherichia coliPROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)), TRNAGLN2X-RAY DIFFRACTION2.71996-12-07
51GTR|1|BSTRUCTURAL BASIS OF ANTICODON LOOP RECOGNITION BY GLUTAMINYL-TRNA SYNTHETASEGLUTAMINYL-tRNA SYNTHETASE, RNA (74-MER)X-RAY DIFFRACTION2.51995-02-07
61GTS|1|BSTRUCTURAL BASIS FOR TRANSFER RNA AMINOACEYLATION BY ESCHERICHIA COLI GLUTAMINYL-TRNA SYNTHETASEEscherichia coliPROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)), TRNAGLNX-RAY DIFFRACTION2.81995-02-07
71QRU|1|BGLUTAMINYL-TRNA SYNTHETASE MUTANT I129T COMPLEXED WITH GLUTAMINE TRANSFER RNAEscherichia coliPROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)), TRNAGLN2X-RAY DIFFRACTION31996-12-07
81O0B|1|BCRYSTAL STRUCTURE OF L-GLUTAMINE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASEGlutaminyl-tRNA synthetase, Glutaminyl tRNAX-RAY DIFFRACTION2.72003-04-15
91EUY|1|BGLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA MUTANT AND AN ACTIVE SITE INHIBITORGLUTAMINYL-TRNA SYNTHETASE, GLUTAMINYL TRNAX-RAY DIFFRACTION2.62000-06-04
104JXX|1|BCrystal structure of E coli E. coli glutaminyl-tRNA synthetase bound to tRNA(Gln)(CUG) and ATP from novel cryostabilization conditionsGlutamine--tRNA ligase, RNA (71-MER)X-RAY DIFFRACTION2.32013-05-01
111EXD|1|BCRYSTAL STRUCTURE OF A TIGHT-BINDING GLUTAMINE TRNA BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASEGLUTAMINYL-TRNA SYNTHETASE, GLUTAMINE TRNA APTAMERX-RAY DIFFRACTION2.72000-05-15
122RE8|1|BGlutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMYL)-SULFAMOYL]ADENOSINEGlutaminyl-tRNA synthetase, Glutamine tRNAX-RAY DIFFRACTION2.62008-01-15
135NWY|1|M2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexEscherichia coli16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein S21, 50S ribosomal protein L31, Gln-tRNA, 23S rRNA, 5S rRNA, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, ELECTRON MICROSCOPY2.92017-07-19
142RD2|1|BGlutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINEGlutaminyl-tRNA synthetase, Glutamine tRNAX-RAY DIFFRACTION2.62008-01-15
151ZJW|1|BGlutaminyl-tRNA synthetase complexed to glutamine and 2'deoxy A76 glutamine tRNAGlutaminyl-tRNA synthetase, Glutaminyl-tRNAX-RAY DIFFRACTION2.52005-06-07
164V7L|1|AWThe structures of viomycin bound to the 70S ribosome.Escherichia coli16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Gln, tRNA-Met, tRNA-Gln, Viomycin, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal proteinX-RAY DIFFRACTION32014-07-09
171EUQ|1|BCRYSTAL STRUCTURE OF GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA-GLN MUTANT AND AN ACTIVE-SITE INHIBITORGLUTAMINYL-TRNA SYNTHETASE, GLUTAMINYL TRNAX-RAY DIFFRACTION3.12000-06-04
184V7M|1|AWThe structures of Capreomycin bound to the 70S ribosome.Escherichia coli16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Gln, tRNA-Met, tRNA-Gln, capreomycin IA, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal pX-RAY DIFFRACTION3.452014-07-09
194V7M|1|CWThe structures of Capreomycin bound to the 70S ribosome.Escherichia coli16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Gln, tRNA-Met, tRNA-Gln, capreomycin IA, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal pX-RAY DIFFRACTION3.452014-07-09
204V7L|1|CWThe structures of viomycin bound to the 70S ribosome.Escherichia coli16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Gln, tRNA-Met, tRNA-Gln, Viomycin, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal proteinX-RAY DIFFRACTION32014-07-09
214V7L|1|CYThe structures of viomycin bound to the 70S ribosome.Escherichia coli16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Gln, tRNA-Met, tRNA-Gln, Viomycin, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal proteinX-RAY DIFFRACTION32014-07-09
224V7L|1|AYThe structures of viomycin bound to the 70S ribosome.Escherichia coli16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein Thx, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-Gln, tRNA-Met, tRNA-Gln, Viomycin, 50S ribosomal protein L27, 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36, 23S ribosomal RNA, 5S ribosomal RNA, 50S ribosomal proteinX-RAY DIFFRACTION32014-07-09
231GSG|1|TStructure of E.coli glutaminyl-tRNA synthetase complexed with trnagln and ATP at 2.8 Angstroms resolutionGLUTAMINYL-TRNA SYNTHETASE, TRNAGLNX-RAY DIFFRACTION2.81992-02-24

Release history

Release2.1382.1392.1402.1412.1422.1432.1442.1452.146
Date2017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-16

Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11GTR|1|BSTRUCTURAL BASIS OF ANTICODON LOOP RECOGNITION BY GLUTAMINYL-TRNA SYNTHETASEX-RAY DIFFRACTION2.574
21GTS|1|BSTRUCTURAL BASIS FOR TRANSFER RNA AMINOACEYLATION BY ESCHERICHIA COLI GLUTAMINYL-TRNA SYNTHETASEX-RAY DIFFRACTION2.874
31QRU|1|BGLUTAMINYL-TRNA SYNTHETASE MUTANT I129T COMPLEXED WITH GLUTAMINE TRANSFER RNAX-RAY DIFFRACTION374
41QRT|1|BGLUTAMINYL-TRNA SYNTHETASE MUTANT D235G COMPLEXED WITH GLUTAMINE TRANSFER RNAX-RAY DIFFRACTION2.774
51QRS|1|BGLUTAMINYL-TRNA SYNTHETASE MUTANT D235N COMPLEXED WITH GLUTAMINE TRANSFER RNAX-RAY DIFFRACTION2.674
61QTQ|1|BGLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH TRNA AND AN AMINO ACID ANALOGX-RAY DIFFRACTION2.2574
71O0C|1|BCRYSTAL STRUCTURE OF L-GLUTAMATE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASEX-RAY DIFFRACTION2.774
81O0B|1|BCRYSTAL STRUCTURE OF L-GLUTAMINE AND AMPCPP BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASEX-RAY DIFFRACTION2.774
91ZJW|1|BGlutaminyl-tRNA synthetase complexed to glutamine and 2'deoxy A76 glutamine tRNAX-RAY DIFFRACTION2.574
102RE8|1|BGlutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMYL)-SULFAMOYL]ADENOSINEX-RAY DIFFRACTION2.674
112RD2|1|BGlutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINEX-RAY DIFFRACTION2.674
124JXX|1|BCrystal structure of E coli E. coli glutaminyl-tRNA synthetase bound to tRNA(Gln)(CUG) and ATP from novel cryostabilization conditionsX-RAY DIFFRACTION2.371
131EUY|1|BGLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA MUTANT AND AN ACTIVE SITE INHIBITORX-RAY DIFFRACTION2.673
141EUQ|1|BCRYSTAL STRUCTURE OF GLUTAMINYL-TRNA SYNTHETASE COMPLEXED WITH A TRNA-GLN MUTANT AND AN ACTIVE-SITE INHIBITORX-RAY DIFFRACTION3.172
151EXD|1|BCRYSTAL STRUCTURE OF A TIGHT-BINDING GLUTAMINE TRNA BOUND TO GLUTAMINE AMINOACYL TRNA SYNTHETASEX-RAY DIFFRACTION2.773
164V7M|1|CWThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4574
174V7L|1|AWThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION375
184V7M|1|AWThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4574
194V7L|1|CWThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION375
205NWY|1|M2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.975
211GSG|1|TStructure of E.coli glutaminyl-tRNA synthetase complexed with trnagln and ATP at 2.8 Angstroms resolutionX-RAY DIFFRACTION2.866
224V7L|1|AYThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION375
234V7L|1|CYThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION375