#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18SA3|1|A (rep)Cobalamin riboswitchadenosylcobalamin riboswitch form 2Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00174Adenosylcobalamin-bound riboswitch dimer, form 2Electron microscopy32023-07-26
28SA3|1|BCobalamin riboswitchadenosylcobalamin riboswitch form 2Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00174Adenosylcobalamin-bound riboswitch dimer, form 2Electron microscopy32023-07-26
38SA2|1|BCobalamin riboswitchadenosylcobalamin riboswitch form 1Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00174Adenosylcobalamin-bound riboswitch dimer, form 1Electron microscopy3.12023-07-26
48SA2|1|ACobalamin riboswitchadenosylcobalamin riboswitch form 1Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00174Adenosylcobalamin-bound riboswitch dimer, form 1Electron microscopy3.12023-07-26
58SA4|1|A+ 8SA4|1|BCobalamin riboswitch + Cobalamin riboswitchadenosylcobalamin riboswitch form 3Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00174 + RF00174Adenosylcobalamin-bound riboswitch dimer, form 3Electron microscopy3.12023-07-26
68SA5|1|ACobalamin riboswitchadenosylcobalamin riboswitch form 4Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00174Adenosylcobalamin-bound riboswitch dimer, form 4Electron microscopy3.52023-07-26
78SA5|1|BCobalamin riboswitchadenosylcobalamin riboswitch form 4Caldanaerobacter subterraneus subsp. tengcongensisBacteriaRF00174Adenosylcobalamin-bound riboswitch dimer, form 4Electron microscopy3.52023-07-26

Release history

Release3.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.3603.3613.3623.3633.3643.3653.3663.3673.3683.3693.3703.371
Date2023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-062024-11-132024-11-202024-11-272024-12-042024-12-112024-12-182024-12-252025-01-012025-01-082025-01-152025-01-22

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18SA4|1|A+ 8SA4|1|BAdenosylcobalamin-bound riboswitch dimer, form 3ELECTRON MICROSCOPY3.1189
28SA3|1|BAdenosylcobalamin-bound riboswitch dimer, form 2ELECTRON MICROSCOPY3210
38SA5|1|AAdenosylcobalamin-bound riboswitch dimer, form 4ELECTRON MICROSCOPY3.5210
48SA2|1|BAdenosylcobalamin-bound riboswitch dimer, form 1ELECTRON MICROSCOPY3.1210
58SA2|1|AAdenosylcobalamin-bound riboswitch dimer, form 1ELECTRON MICROSCOPY3.1210
68SA3|1|AAdenosylcobalamin-bound riboswitch dimer, form 2ELECTRON MICROSCOPY3210
78SA5|1|BAdenosylcobalamin-bound riboswitch dimer, form 4ELECTRON MICROSCOPY3.5135

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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