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Equivalence class NR_4.0_73426.5 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17EVO|1|H (rep)U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004The cryo-EM structure of the human 17S U2 snRNPElectron microscopy2.52022-08-03
28HK1|1|HU2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004The cryo-EM structure of human pre-17S U2 snRNPElectron microscopy2.72023-03-08
37Q4O|1|2+ 7Q4O|1|hU2 splicesomal small nuclear RNAU2 snRNA, BPS oligoHomo sapiensEukaryaRF00004Substrate-bound A-like U2 snRNPElectron microscopy2.22022-03-30
47Q4P|1|2U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004U2 snRNP after ATP-dependent remodelling snRNPElectron microscopy2.22022-03-30
57Q3L|1|2U2 splicesomal small nuclear RNAU2 snRNAHomo sapiensEukaryaRF00004Human 17S U2 snRNP 5' domainElectron microscopy2.32022-03-30
67VPX|1|HU2 splicesomal small nuclear RNAU2 snRNA, pre-mRNAHomo sapiensEukaryaRF00004The cryo-EM structure of the human pre-A complexElectron microscopy32023-05-03
76QX9|1|2U2 splicesomal small nuclear RNAU2 snRNA, U6 snRNA, AdML pre-mRNAHomo sapiensEukaryaRF00004Structure of a human fully-assembled precatalytic spliceosome (pre-B complex).Electron microscopy3.282019-04-17
87ONB|1|HU2 splicesomal small nuclear RNARNU2, MINXHomo sapiensEukaryaRF00004Structure of the U2 5' module of the A3'-SSA complexElectron microscopy3.12021-08-04

Release history

Release3.281
Date2023-05-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_73426.5NR_4.0_73426.43.281(6) 7Q4O|1|2+7Q4O|1|h, 7Q3L|1|2, 7EVO|1|H, 6QX9|1|2, 8HK1|1|H, 7Q4P|1|2(2) 7ONB|1|H, 7VPX|1|H(0)
NR_4.0_73426.5NR_4.0_99276.13.281(1) 7ONB|1|H(7) 8HK1|1|H, 7VPX|1|H, 7Q4P|1|2, 7Q4O|1|2+7Q4O|1|h, 7Q3L|1|2, 7EVO|1|H, 6QX9|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_73426.5NR_4.0_73426.63.282(8) 6QX9|1|2, 7EVO|1|H, 7ONB|1|H, 7Q3L|1|2, 7Q4O|1|2+7Q4O|1|h, 7Q4P|1|2, 7VPX|1|H, 8HK1|1|H(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17Q3L|1|2Human 17S U2 snRNP 5' domainELECTRON MICROSCOPY2.341
28HK1|1|HThe cryo-EM structure of human pre-17S U2 snRNPELECTRON MICROSCOPY2.7148
37EVO|1|HThe cryo-EM structure of the human 17S U2 snRNPELECTRON MICROSCOPY2.5148
47VPX|1|HThe cryo-EM structure of the human pre-A complexELECTRON MICROSCOPY3130
57ONB|1|HStructure of the U2 5' module of the A3'-SSA complexELECTRON MICROSCOPY3.132
66QX9|1|2Structure of a human fully-assembled precatalytic spliceosome (pre-B complex).ELECTRON MICROSCOPY3.2894
77Q4O|1|2+7Q4O|1|hSubstrate-bound A-like U2 snRNPELECTRON MICROSCOPY2.224
87Q4P|1|2U2 snRNP after ATP-dependent remodelling snRNPELECTRON MICROSCOPY2.231
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