Equivalence class NR_4.0_83830.1 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 5MPS|1|6 (rep) | Saccharomyces cerevisiae strain T.52_2H chromosome XII sequence, U2 snRNA, Yeast UBC4 gene for ubiquitin-conjugating enzyme | Saccharomyces cerevisiae | Structure of a spliceosome remodeled for exon ligation | ELECTRON MICROSCOPY | 3.85 | 2017-01-18 |
| 2 | 5YLZ|1|D | U6 snRNA, mRNA/intron lariat, U2 snRNA | Saccharomyces cerevisiae | Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom | ELECTRON MICROSCOPY | 3.6 | 2018-07-18 |
| 3 | 5Y88|1|D | U6 snRNA, U2 snRNA, Intron lariat | Saccharomyces cerevisiae | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | ELECTRON MICROSCOPY | 3.46 | 2018-08-01 |
| 4 | 5GMK|1|E+ 5GMK|1|L | U6 snRNA, U2 snRNA, Intron_BPS, 5'-Splicing Site | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | ELECTRON MICROSCOPY | 3.4 | 2016-08-17 | |
| 5 | 5WSG|1|E | Saccharomyces cerevisiae S288c SNR6 snRNA, RNA (91-MER), 3'-intron-lariat, 5'-intron-lariat | Saccharomyces cerevisiae | Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution | ELECTRON MICROSCOPY | 4 | 2017-01-25 |
Release history
| Release | 3.98 | 3.99 | 3.100 | 3.101 | 3.102 | 3.103 | 3.104 | 3.105 | 3.106 | 3.107 | 3.108 | 3.109 | 3.110 | 3.111 | 3.112 | 3.113 | 3.114 | 3.115 | 3.116 | 3.117 | 3.118 | 3.119 | 3.120 | 3.121 | 3.122 | 3.123 | 3.124 | 3.125 | 3.126 | 3.127 | 3.128 | 3.129 | 3.130 | 3.131 | 3.132 | 3.133 | 3.134 | 3.135 | 3.136 | 3.137 | 3.138 | 3.139 | 3.140 | 3.141 | 3.142 | 3.143 | 3.144 | 3.145 | 3.146 | 3.147 | 3.148 | 3.149 | 3.150 | 3.151 | 3.152 | 3.153 | 3.154 | 3.155 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-10-30 | 2019-11-06 | 2019-11-13 | 2019-11-20 | 2019-11-27 | 2019-12-04 | 2019-12-11 | 2019-12-18 | 2019-12-25 | 2020-01-01 | 2020-01-08 | 2020-01-15 | 2020-01-22 | 2020-01-29 | 2020-02-05 | 2020-02-12 | 2020-02-19 | 2020-02-26 | 2020-03-04 | 2020-03-11 | 2020-03-18 | 2020-03-25 | 2020-04-01 | 2020-04-08 | 2020-04-15 | 2020-04-22 | 2020-04-29 | 2020-05-06 | 2020-05-13 | 2020-05-20 | 2020-05-27 | 2020-06-03 | 2020-06-10 | 2020-06-17 | 2020-06-24 | 2020-07-01 | 2020-07-08 | 2020-07-15 | 2020-07-22 | 2020-07-29 | 2020-08-05 | 2020-08-12 | 2020-08-19 | 2020-08-26 | 2020-09-02 | 2020-09-09 | 2020-09-16 | 2020-09-23 | 2020-09-30 | 2020-10-07 | 2020-10-14 | 2020-10-21 | 2020-10-28 | 2020-11-04 | 2020-11-11 | 2020-11-18 | 2020-11-25 | 2020-12-02 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_83830.1 | NR_4.0_56118.6 | 3.98 | (5) 5GMK|1|E+5GMK|1|L, 5Y88|1|D, 5MPS|1|6, 5YLZ|1|D, 5WSG|1|E | (0) | (2) 5VSU|1|I, 6ASO|1|I |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5YLZ|1|D | Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom | ELECTRON MICROSCOPY | 3.6 | 103 |
| 2 | 5WSG|1|E | Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution | ELECTRON MICROSCOPY | 4 | 103 |
| 3 | 5GMK|1|E+5GMK|1|L | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | ELECTRON MICROSCOPY | 3.4 | 103 |
| 4 | 5Y88|1|D | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | ELECTRON MICROSCOPY | 3.46 | 101 |
| 5 | 5MPS|1|6 | Structure of a spliceosome remodeled for exon ligation | ELECTRON MICROSCOPY | 3.85 | 99 |