Equivalence class NR_all_18337.3 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 1QZC|1|B (rep) | 23S rRNA | Escherichia coli | Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome | ELECTRON MICROSCOPY | 9 | 2003-11-04 |
| 2 | 3J0E|1|A | ribosomal 23S RNA | Escherichia coli | Models for the T. thermophilus ribosome recycling factor and the E. coli elongation factor G bound to the E. coli post-termination complex | ELECTRON MICROSCOPY | 9.9 | 2012-04-25 |
| 3 | 3J0D|1|B | ribosomal 23S RNA | Escherichia coli | Models for the T. thermophilus ribosome recycling factor bound to the E. coli post-termination complex | ELECTRON MICROSCOPY | 11.1 | 2012-04-25 |
| 4 | 1T1O|1|B | 19-mer fragment of the 23S rRNA | Escherichia coli | Components of the control 70S ribosome to provide reference for the RRF binding site | ELECTRON MICROSCOPY | 12 | 2004-06-15 |
| 5 | 1MVR|1|C | Helix 69 of 23S rRNA | Escherichia coli | Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S Ribosome | ELECTRON MICROSCOPY | 12.8 | 2003-04-01 |
| 6 | 2MER|1|A | RNA_(5'-R(P*GP*GP*CP*CP*GP*(PSU)P*AP*AP*CP*(PSU)P*AP*(PSU)P*AP*AP*CP*GP*GP*UP*C)-3') | Structure of helix 69 from escherichia coli 23s ribosomal rna | SOLUTION NMR | 2014-01-01 | ||
| 7 | 2MEQ|1|A | RNA_(5'-R(P*GP*GP*CP*CP*GP*UP*AP*AP*CP*UP*AP*UP*AP*AP*CP*GP*GP*UP*C)-3') | Structure of Helix 69 from Escherichia coli 23S Ribosomal RNA | SOLUTION NMR | 2014-01-01 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 1MVR|1|C | Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S Ribosome | ELECTRON MICROSCOPY | 12.8 | 19 |
| 2 | 2MEQ|1|A | Structure of Helix 69 from Escherichia coli 23S Ribosomal RNA | SOLUTION NMR | 19 | |
| 3 | 2MER|1|A | Structure of helix 69 from escherichia coli 23s ribosomal rna | SOLUTION NMR | 16 | |
| 4 | 3J0D|1|B | Models for the T. thermophilus ribosome recycling factor bound to the E. coli post-termination complex | ELECTRON MICROSCOPY | 11.1 | 22 |
| 5 | 3J0E|1|A | Models for the T. thermophilus ribosome recycling factor and the E. coli elongation factor G bound to the E. coli post-termination complex | ELECTRON MICROSCOPY | 9.9 | 22 |
| 6 | 1QZC|1|B | Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome | ELECTRON MICROSCOPY | 9 | 20 |
| 7 | 1T1O|1|B | Components of the control 70S ribosome to provide reference for the RRF binding site | ELECTRON MICROSCOPY | 12 | 19 |