Equivalence class NR_all_30486.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8FVY|1|g (rep) | Transfer RNA | tRNA | Giardia intestinalis assemblage A | Eukarya | RF00005 | 40S subunit of the Giardia lamblia 80S ribosome | Electron microscopy | 2.94 | 2024-01-24 |
| 2 | 8G4S|1|g | Transfer RNA | E-site tRNA | Giardia intestinalis assemblage A | Eukarya | RF00005 | 40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs. | Electron microscopy | 3.14 | 2024-01-31 |
| 3 | 6OKK|1|g | Transfer RNA | E-site tRNA | Plasmodium falciparum | Eukarya | RF00005 | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | Electron microscopy | 3.3 | 2019-05-22 |
| 4 | 3J7A|1|7 | Transfer RNA | tRNA | Plasmodium falciparum | Eukarya | RF00005 | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | Electron microscopy | 3.2 | 2014-07-16 |
| 5 | 3JBP|1|7 | Transfer RNA | E-tRNA | Plasmodium falciparum | Eukarya | RF00005 | Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA | Electron microscopy | 6.7 | 2015-10-14 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8G4S|1|g | 40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs. | ELECTRON MICROSCOPY | 3.14 | 74 |
| 2 | 8FVY|1|g | 40S subunit of the Giardia lamblia 80S ribosome | ELECTRON MICROSCOPY | 2.94 | 74 |
| 3 | 3J7A|1|7 | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | ELECTRON MICROSCOPY | 3.2 | 74 |
| 4 | 6OKK|1|g | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | ELECTRON MICROSCOPY | 3.3 | 74 |
| 5 | 3JBP|1|7 | Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA | ELECTRON MICROSCOPY | 6.7 | 74 |