Equivalence class NR_all_33675.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6YDP|1|BB (rep) | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST) | Electron microscopy | 3 | 2020-07-15 |
| 2 | 7NSH|1|BB | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2 | Electron microscopy | 3.2 | 2021-05-05 |
| 3 | 6GAW|1|BB | Transfer RNA | tRNA-Phe, mitochondrial | Sus scrofa | Mitochondria | RF00005 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | Electron microscopy | 3.2 | 2018-08-22 |
| 4 | 8OIQ|1|B9 | Transfer RNA | CP Phe-tRNA | Sus scrofa | Mitochondria | RF00005 | 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA | Electron microscopy | 3.5 | 2023-06-14 |
| 5 | 6GB2|1|BB | Transfer RNA | CP tRNAPhe, mitochondrial | Sus scrofa | Mitochondria | RF00005 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit. | Electron microscopy | 3.2 | 2018-08-08 |
| 6 | 8OIN|1|B9 | Transfer RNA | CP Phe-tRNA | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA | Electron microscopy | 3.6 | 2023-06-14 |
| 7 | 7NQL|1|BB | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | Electron microscopy | 3.4 | 2021-05-05 |
| 8 | 7NQH|1|BB | Transfer RNA | tRNA(Phe) in LSU | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | Electron microscopy | 3.5 | 2021-05-05 |
| 9 | 7NSJ|1|BB | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*) | Electron microscopy | 3.9 | 2021-06-02 |
| 10 | 6YDW|1|BB | Transfer RNA | CP tRNA-Phe | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST) | Electron microscopy | 4.2 | 2020-07-15 |
| 11 | 7NSI|1|BB | Transfer RNA | CP tRNAPhe | Sus scrofa | Mitochondria | RF00005 | 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E) | Electron microscopy | 4.6 | 2021-06-02 |
Release history
| Release | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 | 3.333 | 3.334 | 3.335 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 | 2024-05-01 | 2024-05-08 | 2024-05-15 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7NSH|1|BB | 39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2 | ELECTRON MICROSCOPY | 3.2 | 67 |
| 2 | 6YDW|1|BB | 55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST) | ELECTRON MICROSCOPY | 4.2 | 67 |
| 3 | 6YDP|1|BB | 55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST) | ELECTRON MICROSCOPY | 3 | 67 |
| 4 | 7NSI|1|BB | 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E) | ELECTRON MICROSCOPY | 4.6 | 67 |
| 5 | 7NSJ|1|BB | 55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*) | ELECTRON MICROSCOPY | 3.9 | 67 |
| 6 | 7NQL|1|BB | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | ELECTRON MICROSCOPY | 3.4 | 67 |
| 7 | 7NQH|1|BB | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | ELECTRON MICROSCOPY | 3.5 | 67 |
| 8 | 6GAW|1|BB | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | ELECTRON MICROSCOPY | 3.2 | 67 |
| 9 | 6GB2|1|BB | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit. | ELECTRON MICROSCOPY | 3.2 | 67 |
| 10 | 8OIN|1|B9 | 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA | ELECTRON MICROSCOPY | 3.6 | 72 |
| 11 | 8OIQ|1|B9 | 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA | ELECTRON MICROSCOPY | 3.5 | 72 |