Equivalence class NR_all_34400.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6MUT|1|G+ 6MUT|1|H (rep) | RNA (5'-R(*GP*UP*GP*GP*AP*AP*AP*GP*GP*CP*GP*GP*GP*CP*AP*GP*AP*GP*GP*C)-3'), RNA (5'-R(P*CP*CP*UP*CP*UP*GP*CP*CP*CP*GP*CP*CP*UP*UP*UP*CP*CP*AP*C)-3') | Thermococcus onnurineus | Archaea | Cryo-EM structure of ternary Csm-crRNA-target RNA with anti-tag sequence complex in type III-A CRISPR-Cas system | Electron microscopy | 3.1 | 2018-12-12 | ||
| 2 | 6MUR|1|G+ 6MUR|1|H | RNA (27-MER), RNA (5'-R(P*GP*CP*AP*AP*AP*CP*CP*GP*CP*CP*UP*CP*UP*GP*CP*CP*CP*GP*C)-3') | Thermococcus onnurineus | Archaea | Cryo-EM structure of Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system | Electron microscopy | 3.1 | 2018-12-12 | ||
| 3 | 6MUU|1|G | RNA (25-MER) | Thermococcus onnurineus | Archaea | Cryo-EM structure of Csm-crRNA binary complex in type III-A CRISPR-Cas system | Electron microscopy | 3 | 2018-12-19 | ||
| 4 | 6MUS|1|G+ 6MUS|1|H | RNA (33-MER), RNA (25-MER) | Thermococcus onnurineus | Archaea | Cryo-EM structure of larger Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system | Electron microscopy | 3.6 | 2018-12-12 |
Release history
| Release | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-12-21 | 2018-12-28 | 2019-01-04 | 2019-01-11 | 2019-01-18 | 2019-01-25 | 2019-02-01 | 2019-02-08 | 2019-02-15 | 2019-02-22 | 2019-03-01 | 2019-03-08 | 2019-03-15 | 2019-03-22 | 2019-03-29 | 2019-04-05 | 2019-04-12 | 2019-04-19 | 2019-04-26 | 2019-05-03 | 2019-05-10 | 2019-05-17 | 2019-05-24 | 2019-05-31 | 2019-06-07 | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_34400.2 | NR_all_34400.1 | 3.53 | (3) 6MUR|1|G+6MUR|1|H, 6MUT|1|G+6MUT|1|H, 6MUS|1|G+6MUS|1|H | (1) 6MUU|1|G | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_34400.2 | NR_all_20773.1 | 3.85 | (4) 6MUR|1|G+6MUR|1|H, 6MUU|1|G, 6MUT|1|G+6MUT|1|H, 6MUS|1|G+6MUS|1|H | (0) | (3) 6O7E|1|G+6O7E|1|H, 6O7I|1|G+6O7I|1|H, 6O7H|1|G+6O7H|1|H |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6MUU|1|G | Cryo-EM structure of Csm-crRNA binary complex in type III-A CRISPR-Cas system | ELECTRON MICROSCOPY | 3 | 25 |
| 2 | 6MUR|1|G+6MUR|1|H | Cryo-EM structure of Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system | ELECTRON MICROSCOPY | 3.1 | 27 |
| 3 | 6MUT|1|G+6MUT|1|H | Cryo-EM structure of ternary Csm-crRNA-target RNA with anti-tag sequence complex in type III-A CRISPR-Cas system | ELECTRON MICROSCOPY | 3.1 | 20 |
| 4 | 6MUS|1|G+6MUS|1|H | Cryo-EM structure of larger Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system | ELECTRON MICROSCOPY | 3.6 | 33 |