#IFECompound(s)RNA source organismTitleMethodResolutionDate
15VYC|1|i2 (rep)Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
25VYC|1|i3Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
35VYC|1|i5Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
45VYC|1|i1Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
55VYC|1|i6Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
65VYC|1|i4Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
76ZMI|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.62020-08-19
86ZM7|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.72020-07-29
96ZLW|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitELECTRON MICROSCOPY2.62020-07-29
106ZVH|1|218S rRNAHomo sapiensEDF1-ribosome complexELECTRON MICROSCOPY2.92020-08-19
116Z6N|1|S218S rRNAHomo sapiensCryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.92020-07-29
126ZOJ|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, composite mapELECTRON MICROSCOPY2.82020-07-22
136ZP4|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.92020-07-29
146ZXG|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State H1ELECTRON MICROSCOPY2.62020-12-02
156QZP|1|S218S rRNA (1740-MER)Homo sapiensHigh-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.92019-04-24
166ZME|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY32020-08-12
176Z6L|1|S218S rRNAHomo sapiensCryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY32020-07-29
186ZV6|1|218S ribosomal RNAHomo sapiensHuman RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)ELECTRON MICROSCOPY2.92021-05-12
196ZON|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1ELECTRON MICROSCOPY32020-07-29
206ZXH|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State H2ELECTRON MICROSCOPY2.72020-12-16
217K5I|1|240S ribosomal rRNA18SHomo sapiensSARS-COV-2 nsp1 in complex with human 40S ribosomeELECTRON MICROSCOPY2.92020-10-14
226ZMO|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.12020-08-19
236Z6M|1|S218S rRNAHomo sapiensCryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.12020-07-29
247MQA|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state post-A1ELECTRON MICROSCOPY2.72021-09-22
256ZXE|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State F2ELECTRON MICROSCOPY32020-12-02
266Y2L|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in POST stateELECTRON MICROSCOPY32020-04-15
276ZUO|1|2pre-18S ribosomal RNAHomo sapiensHuman RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)ELECTRON MICROSCOPY3.12021-05-12
286XA1|1|S218S rRNAHomo sapiensStructure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.82020-10-07
296OM0|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
306OLE|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
316ZN5|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2ELECTRON MICROSCOPY3.22020-07-29
326ZXD|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State F1ELECTRON MICROSCOPY3.22020-12-02
336Y0G|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.22020-04-15
346ZMT|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexELECTRON MICROSCOPY32020-08-19
357A09|1|218S ribosomal RNAHomo sapiensStructure of a human ABCE1-bound 43S pre-initiation complex - State IIIELECTRON MICROSCOPY3.52020-10-14
366OLG|1|B118S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.42019-06-19
376OLI|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.52019-06-19
386ZMW|1|A18S rRNAHomo sapiensStructure of a human 48S translational initiation complexELECTRON MICROSCOPY3.72020-09-23
396Y57|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.52020-04-15
406ZVJ|1|218S ribosomal RNAHomo sapiensStructure of a human ABCE1-bound 43S pre-initiation complex - State IIELECTRON MICROSCOPY3.82020-10-07
416G18|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State CELECTRON MICROSCOPY3.62018-06-06
426G5I|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State RELECTRON MICROSCOPY3.52018-06-06
434UG0|1|S218S ribosomal RNAHomo sapiensSTRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.62015-06-10
446ZXF|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State GELECTRON MICROSCOPY3.72020-12-02
456IP8|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.92019-05-29
466IP5|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.92019-05-29
476G5H|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - MatureELECTRON MICROSCOPY3.62018-06-06
486ZOK|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, focused on bodyELECTRON MICROSCOPY2.82020-07-29
496OM7|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.72019-06-19
506OLZ|1|B118S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.92019-06-19
515AJ0|1|B118S ribosomal RNAHomo sapiensCryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.52015-05-20
526OLF|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.92019-06-19
535A2Q|1|218S RRNAHomo sapiensStructure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.92015-07-15
546YBW|1|A18S rRNAHomo sapiensStructure of a human 48S translational initiation complex - 40S bodyELECTRON MICROSCOPY3.12020-09-16
556G51|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State DELECTRON MICROSCOPY4.12018-06-06
566G4S|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State BELECTRON MICROSCOPY42018-06-06
576IP6|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)ELECTRON MICROSCOPY4.52019-05-29
585OA3|1|218S ribosomal RNAHomo sapiensHuman 40S-eIF2D-re-initiation complexELECTRON MICROSCOPY4.22017-08-09
595LKS|1|S218S ribosomal RNAHomo sapiensStructure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.62017-04-26
607MQ8|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state pre-A1ELECTRON MICROSCOPY3.62021-09-22
616G53|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State EELECTRON MICROSCOPY4.52018-06-06
627MQ9|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state pre-A1*ELECTRON MICROSCOPY3.872021-09-22
636G4W|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State AELECTRON MICROSCOPY4.52018-06-06
644V6X|1|B218S ribosomal RNAHomo sapiensStructure of the human 80S ribosomeELECTRON MICROSCOPY52014-07-09
656ZOL|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, focused on headELECTRON MICROSCOPY2.82020-07-22
665T2C|1|AA18S rRNAHomo sapiensCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.62017-01-25
676FEC|1|A18S ribosomal RNAHomo sapiensHuman cap-dependent 48S pre-initiation complexELECTRON MICROSCOPY6.32018-03-14
685A8L|1|BHUMAN 18S RIBOSOMAL RNAHomo sapiensHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.82015-12-02

Release history

Release3.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.227
Date2021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-20

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15A8L|1|BHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.867
26OM0|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11680
36OM7|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.71680
46OLF|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.91680
56OLE|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11680
66OLI|1|S2Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.51680
76Y57|1|S2Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.51658
86Y0G|1|S2Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.21697
96Y2L|1|S2Structure of human ribosome in POST stateELECTRON MICROSCOPY31713
106XA1|1|S2Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.81512
116ZVH|1|2EDF1-ribosome complexELECTRON MICROSCOPY2.91740
126QZP|1|S2High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.91707
136Z6N|1|S2Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.91740
146Z6L|1|S2Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY31740
156ZMO|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.11740
166ZMI|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.61740
176ZM7|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.71740
186ZME|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY31740
196ZN5|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2ELECTRON MICROSCOPY3.21671
205AJ0|1|B1Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.51708
216OLG|1|B1Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.41708
226OLZ|1|B1Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.91708
236IP6|1|2mCryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)ELECTRON MICROSCOPY4.51742
246IP5|1|2mCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.91742
256IP8|1|2mCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.91742
265LKS|1|S2Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.61742
274UG0|1|S2STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.61742
285T2C|1|AACryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.61742
295VYC|1|i1Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
305VYC|1|i2Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
315VYC|1|i6Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
325VYC|1|i5Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
335VYC|1|i3Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
345VYC|1|i4Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
356FEC|1|AHuman cap-dependent 48S pre-initiation complexELECTRON MICROSCOPY6.31776
366ZXF|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State GELECTRON MICROSCOPY3.71656
376ZXG|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1ELECTRON MICROSCOPY2.61577
386ZXH|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2ELECTRON MICROSCOPY2.71577
396ZV6|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)ELECTRON MICROSCOPY2.91681
406G5H|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - MatureELECTRON MICROSCOPY3.61665
415OA3|1|2Human 40S-eIF2D-re-initiation complexELECTRON MICROSCOPY4.21661
426ZOK|1|2SARS-CoV-2-Nsp1-40S complex, focused on bodyELECTRON MICROSCOPY2.81232
436ZOJ|1|2SARS-CoV-2-Nsp1-40S complex, composite mapELECTRON MICROSCOPY2.81704
446ZOL|1|2SARS-CoV-2-Nsp1-40S complex, focused on headELECTRON MICROSCOPY2.8472
456ZLW|1|2SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitELECTRON MICROSCOPY2.61665
467K5I|1|2SARS-COV-2 nsp1 in complex with human 40S ribosomeELECTRON MICROSCOPY2.91665
477A09|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIIELECTRON MICROSCOPY3.51721
486ZP4|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.91721
496ZMT|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexELECTRON MICROSCOPY31569
506ZXD|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1ELECTRON MICROSCOPY3.21645
516G18|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State CELECTRON MICROSCOPY3.61658
526ZXE|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F2ELECTRON MICROSCOPY31645
536ZUO|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)ELECTRON MICROSCOPY3.11665
546G5I|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State RELECTRON MICROSCOPY3.51657
554V6X|1|B2Structure of the human 80S ribosomeELECTRON MICROSCOPY51861
566ZVJ|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIELECTRON MICROSCOPY3.81720
576ZON|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1ELECTRON MICROSCOPY31721
585A2Q|1|2Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.91665
596Z6M|1|S2Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.11740
606ZMW|1|AStructure of a human 48S translational initiation complexELECTRON MICROSCOPY3.71691
616YBW|1|AStructure of a human 48S translational initiation complex - 40S bodyELECTRON MICROSCOPY3.11196
627MQA|1|L1Cryo-EM structure of the human SSU processome, state post-A1ELECTRON MICROSCOPY2.71570
637MQ9|1|L1Cryo-EM structure of the human SSU processome, state pre-A1*ELECTRON MICROSCOPY3.871301
647MQ8|1|L1Cryo-EM structure of the human SSU processome, state pre-A1ELECTRON MICROSCOPY3.61301
656G51|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State DELECTRON MICROSCOPY4.11659
666G4S|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State BELECTRON MICROSCOPY41613
676G4W|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State AELECTRON MICROSCOPY4.51563
686G53|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State EELECTRON MICROSCOPY4.51659