#IFECompound(s)RNA source organismTitleMethodResolutionDate
14V4R|1|AV (rep)P-site tRNA (Phe)Escherichia coliCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION5.92014-07-09
24V4S|1|AVP-site tRNA (Phe)Escherichia coliCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION6.762014-07-09
34V4T|1|AVP-site tRNA (Phe)Escherichia coliCrystal structure of the whole ribosomal complex with a stop codon in the A-site.X-RAY DIFFRACTION6.462014-07-09
44V4R|1|AWE-site tRNA (Phe)Escherichia coliCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION5.92014-07-09
54V4S|1|AWE-site tRNA (Phe)Escherichia coliCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION6.762014-07-09
64V4T|1|AWE-site tRNA (Phe)Escherichia coliCrystal structure of the whole ribosomal complex with a stop codon in the A-site.X-RAY DIFFRACTION6.462014-07-09
74V49|1|AWtRNA-Phe, mRNAEscherichia coliCrystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.X-RAY DIFFRACTION8.72014-07-09
84V49|1|AVtRNA-Phe, mRNAEscherichia coliCrystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.X-RAY DIFFRACTION8.72014-07-09
94V66|1|AEA/T, P and E-site tRNAsEscherichia coliStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92014-07-09
104V65|1|AEA/T, P and E-site tRNAsEscherichia coliStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92014-07-09
113EP2|1|YtRNAEscherichia coliModel of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EMELECTRON MICROSCOPY92008-12-16
123EQ3|1|YtRNAEscherichia coliModel of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EMELECTRON MICROSCOPY92008-12-16
134V65|1|AAA/T, P and E-site tRNAs, mRNA modelEscherichia coliStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92014-07-09
144V66|1|AAA/T, P and E-site tRNAs, mRNA modelEscherichia coliStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92014-07-09
154V66|1|APA/T, P and E-site tRNAs, mRNA modelEscherichia coliStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92014-07-09
164V65|1|APA/T, P and E-site tRNAs, mRNA modelEscherichia coliStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92014-07-09
174V48|1|A6tRNA-PHEEscherichia coliReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.52014-07-09
183DEG|1|AA/L-tRNAEscherichia coliComplex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.92008-08-19
191MJ1|1|CPhe-tRNAEscherichia coliFITTING THE TERNARY COMPLEX OF EF-Tu/tRNA/GTP AND RIBOSOMAL PROTEINS INTO A 13 A CRYO-EM MAP OF THE COLI 70S RIBOSOMEELECTRON MICROSCOPY132002-11-01
201ZO1|1|FP/I-site tRNAEscherichia coliIF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complexELECTRON MICROSCOPY13.82005-06-14
211ZO3|1|AtRNAEscherichia coliThe P-site and P/E-site tRNA structures fitted to P/I site codon.ELECTRON MICROSCOPY13.82005-06-14
221ZO3|1|BtRNAEscherichia coliThe P-site and P/E-site tRNA structures fitted to P/I site codon.ELECTRON MICROSCOPY13.82005-06-14
231ML5|1|BT-RNA(PHE), A- AND P-SITE MESSENGER RNA CODONSEscherichia coliStructure of the E. coli ribosomal termination complex with release factor 2ELECTRON MICROSCOPY142003-01-14
241MJ1|1|DPhe-tRNAEscherichia coliFITTING THE TERNARY COMPLEX OF EF-Tu/tRNA/GTP AND RIBOSOMAL PROTEINS INTO A 13 A CRYO-EM MAP OF THE COLI 70S RIBOSOMEELECTRON MICROSCOPY132002-11-01
254V4W|1|AWtRNAEscherichia coliStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152014-07-09
264V4W|1|AVtRNAEscherichia coliStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152014-07-09
274V4W|1|AUtRNAEscherichia coliStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152014-07-09
284V4V|1|AVtRNAEscherichia coliStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152014-07-09
294V4V|1|AWtRNAEscherichia coliStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152014-07-09
304V4V|1|AUtRNAEscherichia coliStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152014-07-09

Release history

Release3.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.206
Date2020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-24

Children

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13DEG|1|AComplex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.962
24V66|1|AAStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY975
34V49|1|AWCrystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.X-RAY DIFFRACTION8.776
44V4W|1|AWStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY1576
51MJ1|1|DFITTING THE TERNARY COMPLEX OF EF-Tu/tRNA/GTP AND RIBOSOMAL PROTEINS INTO A 13 A CRYO-EM MAP OF THE COLI 70S RIBOSOMEELECTRON MICROSCOPY1362
61ZO3|1|BThe P-site and P/E-site tRNA structures fitted to P/I site codon.ELECTRON MICROSCOPY13.876
71ZO3|1|AThe P-site and P/E-site tRNA structures fitted to P/I site codon.ELECTRON MICROSCOPY13.876
81ZO1|1|FIF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complexELECTRON MICROSCOPY13.876
94V4V|1|AVStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY1576
104V4V|1|AWStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY1576
114V4V|1|AUStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY1576
124V4W|1|AUStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY1576
134V4W|1|AVStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY1576
144V4S|1|AWCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION6.7673
154V4R|1|AWCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION5.973
164V4T|1|AWCrystal structure of the whole ribosomal complex with a stop codon in the A-site.X-RAY DIFFRACTION6.4673
174V65|1|AEStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY976
184V66|1|AEStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY976
194V65|1|APStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY975
204V66|1|APStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY975
214V4T|1|AVCrystal structure of the whole ribosomal complex with a stop codon in the A-site.X-RAY DIFFRACTION6.4676
224V4R|1|AVCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION5.976
234V4S|1|AVCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION6.7676
244V49|1|AVCrystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.X-RAY DIFFRACTION8.776
251MJ1|1|CFITTING THE TERNARY COMPLEX OF EF-Tu/tRNA/GTP AND RIBOSOMAL PROTEINS INTO A 13 A CRYO-EM MAP OF THE COLI 70S RIBOSOMEELECTRON MICROSCOPY1362
261ML5|1|BStructure of the E. coli ribosomal termination complex with release factor 2ELECTRON MICROSCOPY1462
274V65|1|AAStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY975
284V48|1|A6Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.576
293EQ3|1|YModel of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EMELECTRON MICROSCOPY974
303EP2|1|YModel of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EMELECTRON MICROSCOPY974