NR_all_83717.3

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4V54\|1\|DB (rep)	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
2	4V54\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-ray diffraction	3.3	2014-07-09
3	4WWW\|1\|RA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
4	4V7T\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
5	4V6C\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
6	4V52\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
7	4V7S\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
8	4V52\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-ray diffraction	3.21	2014-07-09
9	2J28\|1\|B	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	MODEL OF E. COLI SRP BOUND TO 70S RNCS	Electron microscopy	9.5	2006-11-08
10	4V4Q\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
11	4V7U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
12	4V4Q\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-ray diffraction	3.46	2014-07-09
13	4V50\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
14	4V53\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
15	3J5L\|1\|A	Large subunit ribosomal RNA	23S ribsomal RNA, 5'-R(CPCPA)-3', 5'-R(CP*(MA6))-3'	Escherichia coli	Bacteria	RF02541	Structure of the E. coli 50S subunit with ErmBL nascent chain	Electron microscopy	6.6	2014-03-26
16	4V9P\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
17	4V50\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-ray diffraction	3.22	2014-07-09
18	4V85\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-ray diffraction	3.2	2014-07-09
19	4V53\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-ray diffraction	3.54	2014-07-09
20	4V4H\|1\|DB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
21	4V9O\|1\|EA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
22	4V4H\|1\|BB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-ray diffraction	3.46	2014-07-09
23	4V55\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
24	4V57\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
25	4V7V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
26	4V64\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
27	4V57\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-ray diffraction	3.5	2014-07-09
28	4V64\|1\|DB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-ray diffraction	3.5	2014-07-09
29	4V5Y\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).	X-ray diffraction	4.45	2014-07-09
30	4V5Y\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).	X-ray diffraction	4.45	2014-07-09
31	4V55\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-ray diffraction	4	2014-07-09
32	4V89\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-ray diffraction	3.7	2014-07-09
33	4V6D\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
34	4V9D\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
35	4U27\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
36	4U25\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
37	4U24\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
38	4V6E\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
39	4V9P\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
40	4V9P\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
41	4V9O\|1\|AA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
42	4U1U\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
43	4WF1\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
44	3J7Z\|1\|A	Large subunit ribosomal RNA	23S rRNA, P-tRNA CCA-end	Escherichia coli	Bacteria	RF02541	Structure of the E. coli 50S subunit with ErmCL nascent chain	Electron microscopy	3.9	2014-10-22
45	4V9O\|1\|CA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
46	4V56\|1\|DB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
47	4UY8\|1\|A	Large subunit ribosomal RNA	RRNA-23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	Electron microscopy	3.8	2014-10-29
48	4U1V\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
49	4V56\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-ray diffraction	3.93	2014-07-09
50	4V6T\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading	Electron microscopy	8.3	2014-07-09
51	4V7B\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Visualization of two tRNAs trapped in transit during EF-G-mediated translocation	Electron microscopy	6.8	2014-07-09
52	4V9P\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
53	4U26\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
54	4U20\|1\|BA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
55	5AFI\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
56	4V9D\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-ray diffraction	3	2014-07-09
57	4U1U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to quinupristin.	X-ray diffraction	2.95	2014-07-30
58	4V6D\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.81	2014-07-09
59	4U20\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin.	X-ray diffraction	2.9	2014-07-30
60	4V6C\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.19	2014-07-09
61	4V9C\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
62	4V5H\|1\|BB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.	Electron microscopy	5.8	2014-07-09
63	4U1V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to linopristin.	X-ray diffraction	3	2014-07-30
64	4V6V\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Tetracycline resistance protein Tet(O) bound to the ribosome	Electron microscopy	9.8	2014-07-09
65	4V69\|1\|BB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Ternary complex-bound E.coli 70S ribosome.	Electron microscopy	6.7	2014-07-09
66	4U25\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-ray diffraction	2.9	2014-07-30
67	4V6E\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-ray diffraction	3.71	2014-07-09
68	4V9O\|1\|GA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Control of ribosomal subunit rotation by elongation factor G	X-ray diffraction	2.9	2014-07-09
69	4V6M\|1\|B8	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Structure of the ribosome-SecYE complex in the membrane environment	Electron microscopy	7.1	2014-07-09
70	4U27\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-ray diffraction	2.8	2014-07-30
71	4V7T\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-ray diffraction	3.19	2014-07-09
72	4V7S\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to telithromycin.	X-ray diffraction	3.25	2014-07-09
73	4V75\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)	Electron microscopy	12	2014-07-09
74	4V7V\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to clindamycin.	X-ray diffraction	3.29	2014-07-09
75	4V6Y\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)	Electron microscopy	12	2014-07-09
76	4WF1\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to negamycin.	X-ray diffraction	3.09	2014-11-05
77	4V7A\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)	Electron microscopy	9	2014-07-09
78	4V6Z\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)	Electron microscopy	12	2014-07-09
79	4V72\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)	Electron microscopy	13	2014-07-09
80	4V76\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)	Electron microscopy	17	2014-07-09
81	4CSU\|1\|B	Large subunit ribosomal RNA	23S RRNA	Escherichia coli	Bacteria	RF02541	Cryo-EM structures of the 50S ribosome subunit bound with ObgE	Electron microscopy	5.5	2014-06-04
82	4V73\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)	Electron microscopy	15	2014-07-09
83	4WWW\|1\|YA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to CEM-101	X-ray diffraction	3.1	2014-12-24
84	4U24\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-ray diffraction	2.9	2014-07-30
85	4V70\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)	Electron microscopy	17	2014-07-09
86	4V7I\|1\|A8	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Ribosome-SecY complex.	Electron microscopy	9.6	2014-07-09
87	4U26\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-ray diffraction	2.8	2014-07-30
88	4V9C\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Allosteric control of the ribosome by small-molecule antibiotics	X-ray diffraction	3.3	2014-07-09
89	4V74\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)	Electron microscopy	17	2014-07-09
90	4V77\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)	Electron microscopy	17	2014-07-09
91	4V78\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)	Electron microscopy	20	2014-07-09
92	4V6K\|1\|AB	Large subunit ribosomal RNA	ribosomal RNA 23S	Escherichia coli	Bacteria	RF02541	Structural insights into cognate vs. near-cognate discrimination during decoding.	Electron microscopy	8.25	2014-07-09
93	4V71\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)	Electron microscopy	20	2014-07-09
94	4V79\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)	Electron microscopy	15	2014-07-09
95	3BBX\|1\|B	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex	Electron microscopy	10	2008-10-21
96	4V7U\|1\|DA	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Crystal structure of the E. coli ribosome bound to erythromycin.	X-ray diffraction	3.1	2014-07-09
97	4V6L\|1\|BB	Large subunit ribosomal RNA	50S ribosomal RNA 23S	Escherichia coli	Bacteria	RF02541	Structural insights into cognate vs. near-cognate discrimination during decoding.	Electron microscopy	13.2	2014-07-09
98	4V6N\|1\|AB	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)	Electron microscopy	12.1	2014-07-09
99	4V7D\|1\|AA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70StRNAEF-G structure)	Electron microscopy	7.6	2014-07-09
100	4V6O\|1\|BB	Large subunit ribosomal RNA	23S ribomosomal RNA	Escherichia coli	Bacteria	RF02541	Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)	Electron microscopy	14.7	2014-07-09
101	3J8G\|1\|B	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit	Electron microscopy	5	2014-11-26
102	4V6R\|1\|BB	Large subunit ribosomal RNA	23S ribomosomal RNA	Escherichia coli	Bacteria	RF02541	Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)	Electron microscopy	11.5	2014-07-09
103	4V6Q\|1\|BB	Large subunit ribosomal RNA	23S ribomosomal RNA	Escherichia coli	Bacteria	RF02541	Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)	Electron microscopy	11.5	2014-07-09
104	4V6S\|1\|AB	Large subunit ribosomal RNA	23S ribomosomal RNA	Escherichia coli	Bacteria	RF02541	Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)	Electron microscopy	13.1	2014-07-09
105	4V6P\|1\|BB	Large subunit ribosomal RNA	23S ribomosomal RNA	Escherichia coli	Bacteria	RF02541	Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)	Electron microscopy	13.5	2014-07-09
106	4V7C\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)	Electron microscopy	7.6	2014-07-09
107	4V5B\|1\|AB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
108	4V5B\|1\|CB	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	Structure of PDF binding helix in complex with the ribosome	X-ray diffraction	3.74	2014-07-09
109	1C2W\|1\|B	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION	Electron microscopy	7.5	2000-04-10
110	4V4V\|1\|B0	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056	Electron microscopy	15	2014-07-09
111	4V4W\|1\|B0	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143	Electron microscopy	15	2014-07-09
112	4V66\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E. coli ribosome and the tRNAs in Post-accommodation state	Electron microscopy	9	2014-07-09
113	4V65\|1\|BB	Large subunit ribosomal RNA	23S rRNA	Escherichia coli	Bacteria	RF02541	Structure of the E. coli ribosome in the Pre-accommodation state	Electron microscopy	9	2014-07-09
114	3DG0\|1\|B	Large subunit ribosomal RNA	23S Ribosomal RNA from E. coli	Escherichia coli	Bacteria	RF02541	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex	Electron microscopy	10.8	2009-02-03
115	2RDO\|1\|B	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Escherichia coli	Bacteria	RF02541	50S subunit with EF-G(GDPNP) and RRF bound	Electron microscopy	9.1	2008-03-04
116	3DG2\|1\|B	Large subunit ribosomal RNA	23S Ribosomal RNA from E. coli	Escherichia coli	Bacteria	RF02541	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex	Electron microscopy	10	2009-02-03
117	3DG5\|1\|B	Large subunit ribosomal RNA	23S Ribosomal RNA from E. coli	Escherichia coli	Bacteria	RF02541	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex	Electron microscopy	15.5	2009-02-03
118	3DG4\|1\|B	Large subunit ribosomal RNA	23S RibosomaL RNA from E. coli	Escherichia coli	Bacteria	RF02541	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex	Electron microscopy	12.8	2009-02-03
119	4V48\|1\|A0	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome	Electron microscopy	11.5	2014-07-09
120	4V47\|1\|A0	Large subunit ribosomal RNA	23S ribosomal RNA	Escherichia coli	Bacteria	RF02541	Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome	Electron microscopy	12.3	2014-07-09

Release history

Release	2.14
Date	2015-03-13

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_all_83717.3	NR_all_83717.2	2.14	(119) 4V74\|1\|BA, 4U24\|1\|BA, 4V9P\|1\|GA, 4V5B\|1\|CB, 4V73\|1\|BA, 4U20\|1\|DA, 4V9P\|1\|EA, 4V5B\|1\|AB, 4V72\|1\|BA, 4U20\|1\|BA, 4V9P\|1\|CA, 4V57\|1\|DB, 4V71\|1\|BA, 4U1V\|1\|DA, 4V9P\|1\|AA, 4V57\|1\|BB, 4V70\|1\|BA, 4U1V\|1\|BA, 4V9O\|1\|GA, 4V56\|1\|DB, 4V6Z\|1\|BA, 4U1U\|1\|DA, 4V9O\|1\|EA, 4V56\|1\|BB, 4U1U\|1\|BA, 4V9O\|1\|CA, 4V55\|1\|DB, 4V6Y\|1\|BA, 4CSU\|1\|B, 4V9O\|1\|AA, 4V55\|1\|BB, 4V6V\|1\|BA, 3J8G\|1\|B, 4V9D\|1\|DA, 4V54\|1\|DB, 4V6T\|1\|BA, 3J7Z\|1\|A, 4V9D\|1\|CA, 4V54\|1\|BB, 4V6S\|1\|AB, 3J5L\|1\|A, 4V9C\|1\|DA, 4V53\|1\|DB, 4V6R\|1\|BB, 3DG5\|1\|B, 4V9C\|1\|BA, 4V53\|1\|BB, 4V6Q\|1\|BB, 3DG4\|1\|B, 4V89\|1\|BA, 4V52\|1\|DB, 4V6P\|1\|BB, 3DG2\|1\|B, 4V85\|1\|BA, 4V52\|1\|BB, 4V6O\|1\|BB, 3DG0\|1\|B, 4V7V\|1\|DA, 4V50\|1\|DB, 4V6N\|1\|AB, 3BBX\|1\|B, 4V7V\|1\|BA, 4V50\|1\|BB, 4V6M\|1\|B8, 2RDO\|1\|B, 4V7U\|1\|DA, 4V4W\|1\|B0, 4V6L\|1\|BB, 2J28\|1\|B, 4V7U\|1\|BA, 4V4V\|1\|B0, 4V6K\|1\|AB, 1C2W\|1\|B, 4V7T\|1\|DA, 4V4Q\|1\|DB, 4V6E\|1\|DA, 4V7T\|1\|BA, 4V4Q\|1\|BB, 4V6E\|1\|BA, 4V7S\|1\|DA, 4V4H\|1\|DB, 4V6D\|1\|DA, 4V7S\|1\|BA, 4V4H\|1\|BB, 4V6D\|1\|BA, 4V7I\|1\|A8, 4V48\|1\|A0, 4V6C\|1\|DA, 4V7D\|1\|AA, 4V47\|1\|A0, 4V6C\|1\|BA, 4V7C\|1\|BA, 4UY8\|1\|A, 4V69\|1\|BB, 4V7	(1) 5AFI\|1\|A	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_all_83717.3	NR_20.0_83717.4	2.15	(119) 4V7B\|1\|BA, 4V73\|1\|BA, 4V72\|1\|BA, 4V71\|1\|BA, 4V70\|1\|BA, 4V6Z\|1\|BA, 4V6Y\|1\|BA, 4V74\|1\|BA, 4V75\|1\|BA, 4V7A\|1\|BA, 4V79\|1\|BA, 4V78\|1\|BA, 4V77\|1\|BA, 4V76\|1\|BA, 4V6V\|1\|BA, 4V6T\|1\|BA, 4V6L\|1\|BB, 4V6K\|1\|AB, 4V6E\|1\|DA, 4V6E\|1\|BA, 4V6D\|1\|DA, 4V6D\|1\|BA, 4V6M\|1\|B8, 4V6N\|1\|AB, 4V6S\|1\|AB, 4V6R\|1\|BB, 4V6Q\|1\|BB, 4V6P\|1\|BB, 4V6O\|1\|BB, 4V6C\|1\|DA, 4V7C\|1\|BA, 5AFI\|1\|A, 4V9P\|1\|AA, 4V9O\|1\|GA, 4V9O\|1\|EA, 4V9O\|1\|CA, 4V9O\|1\|AA, 4V9D\|1\|DA, 4V9P\|1\|CA, 4V9P\|1\|EA, 4WWW\|1\|YA, 4WWW\|1\|RA, 4WF1\|1\|DA, 4WF1\|1\|BA, 4V9P\|1\|GA, 4V9D\|1\|CA, 4V9C\|1\|DA, 4V7T\|1\|DA, 4V7T\|1\|BA, 4V7S\|1\|DA, 4V7S\|1\|BA, 4V7I\|1\|A8, 4V7D\|1\|AA, 4V7U\|1\|BA, 4V7U\|1\|DA, 4V9C\|1\|BA, 4V89\|1\|BA, 4V85\|1\|BA, 4V7V\|1\|DA, 4V7V\|1\|BA, 4V4H\|1\|DB, 4U26\|1\|BA, 4U25\|1\|DA, 4U25\|1\|BA, 4U24\|1\|DA, 4U24\|1\|BA, 4U20\|1\|DA, 4U20\|1\|BA, 4U26\|1\|DA, 4V4H\|1\|BB, 4V48\|1\|A0, 4V47\|1\|A0, 4UY8\|1\|A, 4U27\|1\|DA, 4U27\|1\|BA, 4U1V\|1\|DA, 3DG5\|1\|B, 3DG4\|1\|B, 3DG2\|1\|B, 3DG0\|1\|B, 3BBX\|1\|B, 2RDO\|1\|B, 2J28\|1\|B, 3J5L\|1\|A, 4U1V\|1\|BA, 4U1U\|1\|DA, 4U1U\|1\|BA, 4CSU\|1\|B, 3J8G\|1\|B, 3J7Z\|1\|A, 4V5Y\|1\|BB, 4V5H\|1\|BB, 4V5B\|1\|CB, 4V5B\|1\|AB, 4V5	(1) 1C2W\|1\|B	(2) 4YBB\|1\|DA, 4YBB\|1\|CA
NR_all_83717.3	NR_3.0_83717.4	2.15	(25) 4U24\|1\|BA, 4U24\|1\|DA, 4U20\|1\|DA, 4U20\|1\|BA, 4U25\|1\|BA, 4U25\|1\|DA, 4U1U\|1\|DA, 4U1V\|1\|BA, 4U1U\|1\|BA, 4U1V\|1\|DA, 4V9O\|1\|AA, 4V9O\|1\|CA, 4V9D\|1\|DA, 4V9O\|1\|GA, 4V9P\|1\|AA, 4V9O\|1\|EA, 4U26\|1\|DA, 4U27\|1\|BA, 4U26\|1\|BA, 4V9D\|1\|CA, 4U27\|1\|DA, 4V9P\|1\|GA, 4V9P\|1\|EA, 5AFI\|1\|A, 4V9P\|1\|CA	(95) 4V7T\|1\|BA, 4V7S\|1\|DA, 4V7S\|1\|BA, 4V7I\|1\|A8, 4V7D\|1\|AA, 4V7T\|1\|DA, 4V7U\|1\|BA, 4V7U\|1\|DA, 4V7V\|1\|BA, 4V7V\|1\|DA, 4V85\|1\|BA, 4V89\|1\|BA, 4V9C\|1\|BA, 4V7C\|1\|BA, 4V7B\|1\|BA, 4V6Z\|1\|BA, 4V70\|1\|BA, 4V71\|1\|BA, 4V72\|1\|BA, 4V73\|1\|BA, 4V74\|1\|BA, 4V75\|1\|BA, 4V76\|1\|BA, 4V77\|1\|BA, 4V78\|1\|BA, 4V79\|1\|BA, 4V7A\|1\|BA, 4V6Y\|1\|BA, 4V9C\|1\|DA, 4WF1\|1\|BA, 4CSU\|1\|B, 4UY8\|1\|A, 4V47\|1\|A0, 4V48\|1\|A0, 4V4H\|1\|BB, 4V4H\|1\|DB, 4V4Q\|1\|BB, 4V4Q\|1\|DB, 4V4V\|1\|B0, 4V4W\|1\|B0, 4V50\|1\|BB, 4V50\|1\|DB, 3J8G\|1\|B, 3J7Z\|1\|A, 4WF1\|1\|DA, 4WWW\|1\|RA, 4WWW\|1\|YA, 1C2W\|1\|B, 2J28\|1\|B, 2RDO\|1\|B, 3BBX\|1\|B, 3DG0\|1\|B, 3DG2\|1\|B, 3DG4\|1\|B, 3DG5\|1\|B, 3J5L\|1\|A, 4V52\|1\|BB, 4V52\|1\|DB, 4V53\|1\|BB, 4V53\|1\|DB, 4V54\|1\|BB, 4V54\|1\|DB, 4V55\|1\|BB, 4V55\|1\|DB, 4V56\|1\|BB, 4V56\|1\|DB, 4V57\|1\|BB, 4V57\|1\|DB, 4V6E\|1\|BA, 4V6E\|1\|DA, 4V6K\|1\|AB, 4V6L\|1\|BB, 4V6M\|1\|B8, 4V6N\|1\|AB, 4V6O\|1\|BB, 4V6P\|1\|BB, 4V6Q\|1\|BB, 4V6R\|1\|BB, 4V6S\|1\|AB, 4V6T\|1\|BA, 4V6D\|1\|DA, 4V6D\|1\|BA, 4V5B\|1\|AB, 4V5B\|1\|CB, 4V5H\|1\|BB, 4V5Y\|1\|BB, 4V5Y\|1\|DB, 4V64\|1\|BB, 4V64\|1\|DB, 4V65\|1\|BB, 4V66\|1\|BB, 4V69\|1\|BB, 4V6C\|1\|BA, 4V6C\|1\|DA, 4V6	(2) 4YBB\|1\|CA, 4YBB\|1\|DA
NR_all_83717.3	NR_3.5_83717.4	2.15	(56) 4U24\|1\|BA, 4U20\|1\|DA, 4U24\|1\|DA, 4U20\|1\|BA, 4U25\|1\|BA, 4U25\|1\|DA, 4U1U\|1\|DA, 4U1V\|1\|BA, 4U1U\|1\|BA, 4U1V\|1\|DA, 4V52\|1\|BB, 4V50\|1\|DB, 4V52\|1\|DB, 4V50\|1\|BB, 4V4Q\|1\|DB, 4V57\|1\|BB, 4V54\|1\|DB, 4V57\|1\|DB, 4V54\|1\|BB, 4U27\|1\|BA, 4U26\|1\|DA, 4U27\|1\|DA, 4U26\|1\|BA, 4V4Q\|1\|BB, 4V4H\|1\|DB, 4V4H\|1\|BB, 4V7V\|1\|BA, 4V7U\|1\|DA, 4V7V\|1\|DA, 4V7U\|1\|BA, 4V7T\|1\|DA, 4V9C\|1\|DA, 4V9C\|1\|BA, 4V9D\|1\|CA, 4V85\|1\|BA, 4V6C\|1\|BA, 4V64\|1\|DB, 4V6C\|1\|DA, 4V64\|1\|BB, 4V7T\|1\|BA, 4V7S\|1\|DA, 4V7S\|1\|BA, 4WF1\|1\|BA, 4V9P\|1\|GA, 4WF1\|1\|DA, 4V9P\|1\|EA, 4V9P\|1\|CA, 4WWW\|1\|YA, 5AFI\|1\|A, 4WWW\|1\|RA, 4V9O\|1\|CA, 4V9O\|1\|AA, 4V9O\|1\|EA, 4V9D\|1\|DA, 4V9P\|1\|AA, 4V9O\|1\|GA	(64) 4V6R\|1\|BB, 4V6S\|1\|AB, 4V6T\|1\|BA, 4V6V\|1\|BA, 4V6Y\|1\|BA, 4V6Z\|1\|BA, 4V70\|1\|BA, 4V71\|1\|BA, 4V6Q\|1\|BB, 4V6P\|1\|BB, 4V6D\|1\|DA, 4V6E\|1\|BA, 4V6E\|1\|DA, 4V6K\|1\|AB, 4V6L\|1\|BB, 4V6M\|1\|B8, 4V6N\|1\|AB, 4V6O\|1\|BB, 4V72\|1\|BA, 4V73\|1\|BA, 3DG0\|1\|B, 3BBX\|1\|B, 2RDO\|1\|B, 2J28\|1\|B, 1C2W\|1\|B, 4V89\|1\|BA, 4V7I\|1\|A8, 4V7D\|1\|AA, 4V7C\|1\|BA, 4V7B\|1\|BA, 4V7A\|1\|BA, 4V79\|1\|BA, 4V78\|1\|BA, 4V77\|1\|BA, 4V76\|1\|BA, 4V75\|1\|BA, 4V74\|1\|BA, 3DG2\|1\|B, 4V6D\|1\|BA, 4CSU\|1\|B, 3J8G\|1\|B, 3J7Z\|1\|A, 3J5L\|1\|A, 3DG5\|1\|B, 3DG4\|1\|B, 4UY8\|1\|A, 4V47\|1\|A0, 4V69\|1\|BB, 4V66\|1\|BB, 4V65\|1\|BB, 4V5Y\|1\|DB, 4V5Y\|1\|BB, 4V5H\|1\|BB, 4V5B\|1\|CB, 4V5B\|1\|AB, 4V56\|1\|DB, 4V56\|1\|BB, 4V55\|1\|DB, 4V55\|1\|BB, 4V53\|1\|DB, 4V53\|1\|BB, 4V4W\|1\|B0, 4V4V\|1\|B0, 4V48\|1\|A0	(2) 4YBB\|1\|CA, 4YBB\|1\|DA
NR_all_83717.3	NR_4.0_83717.4	2.15	(71) 4U1U\|1\|BA, 4U1U\|1\|DA, 3J7Z\|1\|A, 4V64\|1\|DB, 4V6C\|1\|BA, 4V64\|1\|BB, 4V6C\|1\|DA, 4V5B\|1\|AB, 4V5B\|1\|CB, 4V6E\|1\|BA, 4V6E\|1\|DA, 4V7S\|1\|BA, 4V6D\|1\|BA, 4V6D\|1\|DA, 4V54\|1\|DB, 4V54\|1\|BB, 4V55\|1\|BB, 4V55\|1\|DB, 4V53\|1\|BB, 4V53\|1\|DB, 4V52\|1\|DB, 4V57\|1\|BB, 4V56\|1\|DB, 4V57\|1\|DB, 4V56\|1\|BB, 4WWW\|1\|YA, 4WWW\|1\|RA, 5AFI\|1\|A, 4WF1\|1\|BA, 4WF1\|1\|DA, 4V9P\|1\|GA, 4V4H\|1\|BB, 4V4H\|1\|DB, 4UY8\|1\|A, 4V4Q\|1\|BB, 4U27\|1\|BA, 4U27\|1\|DA, 4V50\|1\|DB, 4V52\|1\|BB, 4V4Q\|1\|DB, 4V50\|1\|BB, 4U20\|1\|BA, 4U20\|1\|DA, 4U24\|1\|BA, 4U1V\|1\|BA, 4U1V\|1\|DA, 4U26\|1\|BA, 4U25\|1\|DA, 4U26\|1\|DA, 4U24\|1\|DA, 4U25\|1\|BA, 4V9O\|1\|AA, 4V9O\|1\|CA, 4V9O\|1\|EA, 4V9D\|1\|CA, 4V9C\|1\|DA, 4V9D\|1\|DA, 4V9P\|1\|EA, 4V9P\|1\|CA, 4V9O\|1\|GA, 4V9P\|1\|AA, 4V7U\|1\|BA, 4V7T\|1\|DA, 4V7U\|1\|DA, 4V7V\|1\|BA, 4V7S\|1\|DA, 4V7T\|1\|BA, 4V89\|1\|BA, 4V9C\|1\|BA, 4V85\|1\|BA, 4V7V\|1\|DA	(49) 4V6M\|1\|B8, 4V6N\|1\|AB, 4V6O\|1\|BB, 4V6P\|1\|BB, 4V6Q\|1\|BB, 4V6R\|1\|BB, 4V6L\|1\|BB, 4V6K\|1\|AB, 4V69\|1\|BB, 4V66\|1\|BB, 4V65\|1\|BB, 4V5Y\|1\|DB, 4V5Y\|1\|BB, 4V5H\|1\|BB, 4V4W\|1\|B0, 4V6S\|1\|AB, 4V6T\|1\|BA, 4V7A\|1\|BA, 4V79\|1\|BA, 4V78\|1\|BA, 4V77\|1\|BA, 4V76\|1\|BA, 4V75\|1\|BA, 4V74\|1\|BA, 4V73\|1\|BA, 4V72\|1\|BA, 4V71\|1\|BA, 4V70\|1\|BA, 4V6Z\|1\|BA, 4V6Y\|1\|BA, 4V6V\|1\|BA, 4V7B\|1\|BA, 4V4V\|1\|B0, 4V7C\|1\|BA, 4V7D\|1\|AA, 4V48\|1\|A0, 4V47\|1\|A0, 4CSU\|1\|B, 3J8G\|1\|B, 3J5L\|1\|A, 3DG5\|1\|B, 3DG4\|1\|B, 3DG2\|1\|B, 3DG0\|1\|B, 3BBX\|1\|B, 2RDO\|1\|B, 2J28\|1\|B, 1C2W\|1\|B, 4V7I\|1\|A8	(2) 4YBB\|1\|DA, 4YBB\|1\|CA
NR_all_83717.3	NR_all_83717.4	2.15	(120) 4V71\|1\|BA, 4V72\|1\|BA, 4V73\|1\|BA, 4V70\|1\|BA, 4V6Z\|1\|BA, 4V6Y\|1\|BA, 4V6V\|1\|BA, 4V74\|1\|BA, 4V7B\|1\|BA, 4V7A\|1\|BA, 4V79\|1\|BA, 4V78\|1\|BA, 4V77\|1\|BA, 4V76\|1\|BA, 4V75\|1\|BA, 4V6T\|1\|BA, 4V6L\|1\|BB, 4V6K\|1\|AB, 4V6E\|1\|DA, 4V6E\|1\|BA, 4V6D\|1\|DA, 4V6D\|1\|BA, 4V6C\|1\|DA, 4V6M\|1\|B8, 4V6S\|1\|AB, 4V6R\|1\|BB, 4V6Q\|1\|BB, 4V6P\|1\|BB, 4V6O\|1\|BB, 4V6N\|1\|AB, 5AFI\|1\|A, 4V9P\|1\|AA, 4V9O\|1\|GA, 4V9O\|1\|EA, 4V9O\|1\|CA, 4V9O\|1\|AA, 4V9D\|1\|DA, 4V9D\|1\|CA, 4V9P\|1\|CA, 4WWW\|1\|YA, 4WWW\|1\|RA, 4WF1\|1\|DA, 4WF1\|1\|BA, 4V9P\|1\|GA, 4V9P\|1\|EA, 4V9C\|1\|DA, 4V7T\|1\|DA, 4V7T\|1\|BA, 4V7S\|1\|DA, 4V7S\|1\|BA, 4V7I\|1\|A8, 4V7D\|1\|AA, 4V7C\|1\|BA, 4V7U\|1\|BA, 4V9C\|1\|BA, 4V89\|1\|BA, 4V85\|1\|BA, 4V7V\|1\|DA, 4V7V\|1\|BA, 4V7U\|1\|DA, 4V4H\|1\|BB, 4U25\|1\|DA, 4U25\|1\|BA, 4U24\|1\|DA, 4U24\|1\|BA, 4U20\|1\|DA, 4U20\|1\|BA, 4U1V\|1\|DA, 4U26\|1\|BA, 4V48\|1\|A0, 4V47\|1\|A0, 4UY8\|1\|A, 4U27\|1\|DA, 4U27\|1\|BA, 4U26\|1\|DA, 4U1V\|1\|BA, 3DG4\|1\|B, 3DG2\|1\|B, 3DG0\|1\|B, 3BBX\|1\|B, 2RDO\|1\|B, 2J28\|1\|B, 1C2W\|1\|B, 3DG5\|1\|B, 4U1U\|1\|DA, 4U1U\|1\|BA, 4CSU\|1\|B, 3J8G\|1\|B, 3J7Z\|1\|A, 3J5L\|1\|A, 4V6C\|1\|BA, 4V5H\|1\|BB, 4V5B\|1\|CB, 4V5B\|1\|AB, 4V57	(0)	(2) 4YBB\|1\|CA, 4YBB\|1\|DA

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	1C2W\|1\|B	23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTION	ELECTRON MICROSCOPY	7.5	2891
2	3J8G\|1\|B	Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit	ELECTRON MICROSCOPY	5	2874
3	3BBX\|1\|B	The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex	ELECTRON MICROSCOPY	10	2902
4	4V79\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)	ELECTRON MICROSCOPY	15	2903
5	4V71\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)	ELECTRON MICROSCOPY	20	2903
6	4V6Y\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)	ELECTRON MICROSCOPY	12	2903
7	4V7A\|1\|BA	E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)	ELECTRON MICROSCOPY	9	2903
8	2J28\|1\|B	MODEL OF E. COLI SRP BOUND TO 70S RNCS	ELECTRON MICROSCOPY	9.5	2841
9	4V4Q\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
10	4V4H\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
11	4V54\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
12	4V55\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	2841
13	4V53\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	2841
14	4V52\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
15	4V5Y\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4.45	2841
16	4V64\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
17	4V57\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
18	4V56\|1\|DB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	2841
19	4V50\|1\|DB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
20	4V5B\|1\|CB	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	2841
21	4V6L\|1\|BB	Structural insights into cognate vs. near-cognate discrimination during decoding.	ELECTRON MICROSCOPY	13.2	2880
22	4V6K\|1\|AB	Structural insights into cognate vs. near-cognate discrimination during decoding.	ELECTRON MICROSCOPY	8.25	2880
23	4V7I\|1\|A8	Ribosome-SecY complex.	ELECTRON MICROSCOPY	9.6	2903
24	4V69\|1\|BB	Ternary complex-bound E.coli 70S ribosome.	ELECTRON MICROSCOPY	6.7	2903
25	4V6V\|1\|BA	Tetracycline resistance protein Tet(O) bound to the ribosome	ELECTRON MICROSCOPY	9.8	2881
26	4V6M\|1\|B8	Structure of the ribosome-SecYE complex in the membrane environment	ELECTRON MICROSCOPY	7.1	2904
27	4V5H\|1\|BB	E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.	ELECTRON MICROSCOPY	5.8	2903
28	4V54\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).	X-RAY DIFFRACTION	3.3	2841
29	4V56\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.	X-RAY DIFFRACTION	3.93	2841
30	4V57\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.	X-RAY DIFFRACTION	3.5	2841
31	4V53\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.	X-RAY DIFFRACTION	3.54	2841
32	4V55\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4	2841
33	4V5Y\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).	X-RAY DIFFRACTION	4.45	2841
34	4V52\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.	X-RAY DIFFRACTION	3.21	2841
35	4V64\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.	X-RAY DIFFRACTION	3.5	2841
36	4V4H\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.	X-RAY DIFFRACTION	3.46	2841
37	4V4Q\|1\|BB	Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.	X-RAY DIFFRACTION	3.46	2841
38	4V5B\|1\|AB	Structure of PDF binding helix in complex with the ribosome	X-RAY DIFFRACTION	3.74	2841
39	4V50\|1\|BB	Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.	X-RAY DIFFRACTION	3.22	2841
40	4V6D\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	2841
41	4V6E\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	2841
42	4V7U\|1\|DA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2841
43	4V7T\|1\|DA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2841
44	4V6C\|1\|DA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2841
45	4WWW\|1\|YA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2841
46	4V7S\|1\|DA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2841
47	4V7V\|1\|DA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2841
48	4U24\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
49	4U26\|1\|DA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
50	4WF1\|1\|DA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
51	4U25\|1\|DA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
52	4U27\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
53	4U1V\|1\|DA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
54	4U20\|1\|DA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
55	4U1U\|1\|DA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
56	4V9D\|1\|DA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2896
57	4V9C\|1\|BA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
58	4V7V\|1\|BA	Crystal structure of the E. coli ribosome bound to clindamycin.	X-RAY DIFFRACTION	3.29	2854
59	3J5L\|1\|A	Structure of the E. coli 50S subunit with ErmBL nascent chain	ELECTRON MICROSCOPY	6.6	2853
60	4V7U\|1\|BA	Crystal structure of the E. coli ribosome bound to erythromycin.	X-RAY DIFFRACTION	3.1	2854
61	4V7T\|1\|BA	Crystal structure of the E. coli ribosome bound to chloramphenicol.	X-RAY DIFFRACTION	3.19	2854
62	4V6C\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.19	2854
63	4WWW\|1\|RA	Crystal structure of the E. coli ribosome bound to CEM-101	X-RAY DIFFRACTION	3.1	2854
64	4V7S\|1\|BA	Crystal structure of the E. coli ribosome bound to telithromycin.	X-RAY DIFFRACTION	3.25	2854
65	4V6E\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.71	2854
66	4V6D\|1\|BA	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting	X-RAY DIFFRACTION	3.81	2854
67	4V85\|1\|BA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	X-RAY DIFFRACTION	3.2	2853
68	4V89\|1\|BA	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)	X-RAY DIFFRACTION	3.7	2853
69	4V9P\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
70	4V9O\|1\|GA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
71	4V9O\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
72	4V9P\|1\|EA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
73	4V9P\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
74	4V9O\|1\|AA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
75	4UY8\|1\|A	Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome	ELECTRON MICROSCOPY	3.8	2854
76	3J7Z\|1\|A	Structure of the E. coli 50S subunit with ErmCL nascent chain	ELECTRON MICROSCOPY	3.9	2854
77	4V9P\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
78	4V9O\|1\|CA	Control of ribosomal subunit rotation by elongation factor G	X-RAY DIFFRACTION	2.9	2854
79	4V7B\|1\|BA	Visualization of two tRNAs trapped in transit during EF-G-mediated translocation	ELECTRON MICROSCOPY	6.8	2854
80	5AFI\|1\|A	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	2876
81	4V6T\|1\|BA	Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading	ELECTRON MICROSCOPY	8.3	2903
82	4V9D\|1\|CA	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding	X-RAY DIFFRACTION	3	2897
83	4U1U\|1\|BA	Crystal structure of the E. coli ribosome bound to quinupristin.	X-RAY DIFFRACTION	2.95	2897
84	4U20\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin.	X-RAY DIFFRACTION	2.9	2897
85	4U1V\|1\|BA	Crystal structure of the E. coli ribosome bound to linopristin.	X-RAY DIFFRACTION	3	2897
86	4WF1\|1\|BA	Crystal structure of the E. coli ribosome bound to negamycin.	X-RAY DIFFRACTION	3.09	2897
87	4U27\|1\|BA	Crystal structure of the E. coli ribosome bound to flopristin and linopristin.	X-RAY DIFFRACTION	2.8	2897
88	4U25\|1\|BA	Crystal structure of the E. coli ribosome bound to virginiamycin M1.	X-RAY DIFFRACTION	2.9	2897
89	4U26\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.	X-RAY DIFFRACTION	2.8	2897
90	4U24\|1\|BA	Crystal structure of the E. coli ribosome bound to dalfopristin.	X-RAY DIFFRACTION	2.9	2897
91	4V9C\|1\|DA	Allosteric control of the ribosome by small-molecule antibiotics	X-RAY DIFFRACTION	3.3	2897
92	4V7C\|1\|BA	Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)	ELECTRON MICROSCOPY	7.6	2897
93	4V7D\|1\|AA	Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70StRNAEF-G structure)	ELECTRON MICROSCOPY	7.6	2897
94	4V6Q\|1\|BB	Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)	ELECTRON MICROSCOPY	11.5	2880
95	4V6R\|1\|BB	Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)	ELECTRON MICROSCOPY	11.5	2880
96	4V6P\|1\|BB	Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)	ELECTRON MICROSCOPY	13.5	2880
97	4V6O\|1\|BB	Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)	ELECTRON MICROSCOPY	14.7	2880
98	4V6N\|1\|AB	Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)	ELECTRON MICROSCOPY	12.1	2880
99	4V6S\|1\|AB	Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)	ELECTRON MICROSCOPY	13.1	2880
100	4CSU\|1\|B	Cryo-EM structures of the 50S ribosome subunit bound with ObgE	ELECTRON MICROSCOPY	5.5	2903
101	4V6Z\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)	ELECTRON MICROSCOPY	12	2903
102	4V78\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)	ELECTRON MICROSCOPY	20	2903
103	4V77\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)	ELECTRON MICROSCOPY	17	2903
104	4V76\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)	ELECTRON MICROSCOPY	17	2903
105	4V73\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)	ELECTRON MICROSCOPY	15	2903
106	4V74\|1\|BA	70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)	ELECTRON MICROSCOPY	17	2903
107	4V72\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)	ELECTRON MICROSCOPY	13	2903
108	4V70\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)	ELECTRON MICROSCOPY	17	2903
109	4V75\|1\|BA	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)	ELECTRON MICROSCOPY	12	2903
110	4V66\|1\|BB	Structure of the E. coli ribosome and the tRNAs in Post-accommodation state	ELECTRON MICROSCOPY	9	2903
111	4V65\|1\|BB	Structure of the E. coli ribosome in the Pre-accommodation state	ELECTRON MICROSCOPY	9	2903
112	4V4V\|1\|B0	Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056	ELECTRON MICROSCOPY	15	2740
113	4V4W\|1\|B0	Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143	ELECTRON MICROSCOPY	15	2740
114	4V47\|1\|A0	Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome	ELECTRON MICROSCOPY	12.3	2536
115	4V48\|1\|A0	Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome	ELECTRON MICROSCOPY	11.5	2536
116	3DG4\|1\|B	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex	ELECTRON MICROSCOPY	12.8	2841
117	3DG5\|1\|B	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex	ELECTRON MICROSCOPY	15.5	2841
118	3DG2\|1\|B	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex	ELECTRON MICROSCOPY	10	2841
119	3DG0\|1\|B	Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex	ELECTRON MICROSCOPY	10.8	2841
120	2RDO\|1\|B	50S subunit with EF-G(GDPNP) and RRF bound	ELECTRON MICROSCOPY	9.1	2841

Equivalence class NR_all_83717.3 Obsolete

Release history

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