Equivalence class NR_all_87323.1 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 7S36|1|R (rep) | Single-guide RNA | Streptococcus pyogenes | Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, closed-protein/bent-DNA conformation | ELECTRON MICROSCOPY | 3.2 | 2022-04-20 |
| 2 | 7S38|1|R | Single-guide RNA | Streptococcus pyogenes | Cas9:sgRNA:DNA (S. pyogenes) forming a 3-base-pair R-loop | ELECTRON MICROSCOPY | 3.3 | 2022-04-20 |
| 3 | 7S3H|1|R | Single-guide RNA | Streptococcus pyogenes | Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, open-protein/linear-DNA conformation | ELECTRON MICROSCOPY | 2.5 | 2022-04-20 |
| 4 | 7S37|1|R | Single-guide RNA | Streptococcus pyogenes | Cas9:sgRNA (S. pyogenes) in the open-protein conformation | ELECTRON MICROSCOPY | 3.2 | 2022-04-20 |
Release history
| Release | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7S38|1|R | Cas9:sgRNA:DNA (S. pyogenes) forming a 3-base-pair R-loop | ELECTRON MICROSCOPY | 3.3 | 87 |
| 2 | 7S36|1|R | Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, closed-protein/bent-DNA conformation | ELECTRON MICROSCOPY | 3.2 | 87 |
| 3 | 7S3H|1|R | Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, open-protein/linear-DNA conformation | ELECTRON MICROSCOPY | 2.5 | 30 |
| 4 | 7S37|1|R | Cas9:sgRNA (S. pyogenes) in the open-protein conformation | ELECTRON MICROSCOPY | 3.2 | 46 |