6SJ6 Summary
- Structure title
- Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus
- Authors
- Release date
- 2020-04-08
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
- Chains
- 2 RNA chains from Staphylococcus aureus
- 24 other chains
- Nucleic acid compounds
- Other compounds
- 23S ribosomal RNA, 5S ribosomal RNA
- 50S ribosomal protein L28, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L32, 50S ribosomal protein L34, 50S ribosomal protein L35, Ribosomal silencing factor RsfS, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27
Pairwise Interactions
Interactions annotated by FR3D:- 528 base-pairs
- 2,527 base-stacking
- 202 base-phosphate
- 191 base-ribose
- 100 oxygen stacking
- 96 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6SJ6 contains:- 78 hairpin loops from 0 motif groups
- 126 internal loops from 0 motif groups
- 48 junction loops from 0 motif groups
3D Redundancy
6SJ6 has chains which belong to the following equivalence classes in the current representative set:- NR_all_90633.28 (1)
- NR_all_83891.27 (1)
- NR_4.0_90633.28 (1)
- NR_4.0_83891.27 (1)
- NR_3.5_90633.28 (1)
- NR_3.5_83891.27 (1)
- NR_20.0_90633.28 (1)
- NR_20.0_83891.27 (1)