- Structure title
- Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin
- Authors
- Milicevic, N., Jenner, L., Myasnikov, A., Yusupov, M., Yusupova, G.
- Release date
- 2023-09-20
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
- Chains
-
7 RNA chains from
Saccharomyces cerevisiae, Escherichia coli
-
76 other chains
- Nucleic acid compounds
25S ribosomal RNA, 5S ribosomal RNA, Transfer RNA Phe, 5.8S ribosomal RNA, Transfer RNA fMet, Messenger RNA, 18S ribosomal RNA
- Other compounds
40S ribosomal protein S24-A, 40S ribosomal protein S25-A, 40S ribosomal protein S26, 40S ribosomal protein S27-A, 40S ribosomal protein S28-A, HLJ1_G0030400.mRNA.1.CDS.1, 40S ribosomal protein S30-A, Guanine nucleotide-binding protein subunit beta-like protein, Ubiquitin-40S ribosomal protein S31, 60S ribosomal protein L16-A, Elongation factor 2, 60S ribosomal protein L17-A, 60S ribosomal protein L18-A, 60S ribosomal protein L19-A, 60S acidic ribosomal protein P0, 60S ribosomal protein L20-A, 60S ribosomal protein L2-A, 60S ribosomal protein L12-A, 60S ribosomal protein L21-A, 60S ribosomal protein L3, 60S ribosomal protein L22-A, 60S ribosomal protein L4-A, 60S ribosomal protein L23-A, 60S ribosomal protein L5, 60S ribosomal protein L24-A, 60S ribosomal protein L6-A, 60S ribosomal protein L25, 60S ribosomal protein L7-A, 60S ribosomal protein L26-A, 60S ribosomal protein L8-A, 60S ribosomal protein L27-A, 60S ribosomal protein L9-A, 60S ribosomal protein L28, 60S ribosomal protein L10, 60S ribosomal protein L29, 60S ribosomal protein L11-A, 60S ribosomal protein L30, 60S ribosomal protein L13-A, 60S ribosomal protein L31-A, 60S ribosomal protein L14-A, 60S ribosomal protein L32, 60S ribosomal protein L15-A, 60S ribosomal protein L33-A, 60S ribosomal protein L34-A, 60S ribosomal protein L35-A, 60S ribosomal protein L36-A, 60S ribosomal protein L37-A, 60S ribosomal protein L38, 60S ribosomal protein L39, Ubiquitin-60S ribosomal protein L40, RPL41A isoform 1, 60S ribosomal protein L42-A, 60S ribosomal protein L43-A, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, 40S ribosomal protein S2, RPS3 isoform 1, 40S ribosomal protein S4-A, 40S ribosomal protein S5, 40S ribosomal protein S6-A, 40S ribosomal protein S7-A, 40S ribosomal protein S8-A, 40S ribosomal protein S9-A, 40S ribosomal protein S10-A, 40S ribosomal protein S11-A, 40S ribosomal protein S13, 40S ribosomal protein S14-A, 40S ribosomal protein S15, 40S ribosomal protein S16-A, 40S ribosomal protein S17-A, 40S ribosomal protein S18-A, 40S ribosomal protein S19-A, 40S ribosomal protein S20, 40S ribosomal protein S21-A, 40S ribosomal protein S22-A, 40S ribosomal protein S23-A
Pairwise Interactions
Interactions annotated by
FR3D:
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RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 8CKU contains:
-
129 hairpin loops from 0 motif groups
-
269 internal loops from 0 motif groups
-
72 junction loops from 0 motif groups
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3D Redundancy
8CKU has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
