HL_10PX_005
3D structure
- PDB id
- 10PX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 10PX|1|1A|A|196, 10PX|1|1A|A|199
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10PX_005 not in the Motif Atlas
- Homologous match to HL_7A0S_006
- Geometric discrepancy: 0.0867
- The information below is about HL_7A0S_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
10PX|1|1A|G|194
10PX|1|1A|A|195
10PX|1|1A|A|196
10PX|1|1A|A|197
10PX|1|1A|C|198
10PX|1|1A|A|199
10PX|1|1A|U|200
10PX|1|1A|C|201
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L28
- Chain 1P
- 50S ribosomal protein L15
Coloring options: