HL_11GG_015
3D structure
- PDB id
- 11GG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11GG_015 not in the Motif Atlas
- Homologous match to HL_6CZR_086
- Geometric discrepancy: 0.1965
- The information below is about HL_6CZR_086
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
11GG|1|C|C|683
11GG|1|C|G|684
11GG|1|C|G|685
11GG|1|C|U|686
11GG|1|C|G|687
11GG|1|C|A|688
11GG|1|C|A|689
11GG|1|C|A|690
11GG|1|C|U|691
11GG|1|C|G|692
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain 3
- Small ribosomal subunit protein bS21
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain n
- Small ribosomal subunit protein uS7
- Chain r
- 30S ribosomal protein S11
Coloring options: