HL_11GG_100
3D structure
- PDB id
- 11GG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 11GG|1|J|G|41
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11GG_100 not in the Motif Atlas
- Homologous match to HL_7A0S_069
- Geometric discrepancy: 0.4179
- The information below is about HL_7A0S_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.3
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
11GG|1|J|C|38
11GG|1|J|A|39
11GG|1|J|U|40
11GG|1|J|G|41
11GG|1|J|C|42
11GG|1|J|C|43
11GG|1|J|G|44
Current chains
- Chain J
- 5S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- Large ribosomal subunit protein uL5
- Chain Q
- 50S ribosomal protein L31
- Chain W
- Large ribosomal subunit protein uL18
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