HL_11HG_021
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 11HG|1|18|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11HG_021 not in the Motif Atlas
- Homologous match to HL_9H3G_095
- Geometric discrepancy: 0.2081
- The information below is about HL_9H3G_095
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
11HG|1|18|G|1054
11HG|1|18|A|1055
11HG|1|18|U|1056
11HG|1|18|C|1057
11HG|1|18|A|1058
11HG|1|18|G|1059
11HG|1|18|A|1060
11HG|1|18|U|1061
11HG|1|18|A|1062
11HG|1|18|C|1063
11HG|1|18|C|1064
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain 28
- Large subunit ribosomal RNA; LSU rRNA
- Chain CE
- Coiled-coil domain-containing protein 124
- Chain GG
- Small ribosomal subunit protein uS11
- Chain UU
- eS26
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