HL_11HV_024

3D structure

PDB id

11HV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 60S ribosomal subunit with eEF2 domain IV open

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

11HV|1|28|A|1984

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11HV_024 not in the Motif Atlas

Homologous match to HL_9AXU_025

Geometric discrepancy: 0.3

The information below is about HL_9AXU_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HV|1|28|C|1978
11HV|1|28|A|1979
11HV|1|28|U|1980
11HV|1|28|G|1981
11HV|1|28|G|1982
11HV|1|28|A|1983
11HV|1|28|A|1984
11HV|1|28|G|1985
11HV|1|28|U|1986
11HV|1|28|C|1987
11HV|1|28|G|1988

Current chains

Chain 28

28S rRNA

Nearby chains

Chain t

uL11

Chain v

Elongation factor 2