HL_11HV_046
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGAACGGGC
- Length
- 10 nucleotides
- Bulged bases
- 11HV|1|28|A|3876, 11HV|1|28|A|3877, 11HV|1|28|C|3878
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11HV_046 not in the Motif Atlas
- Homologous match to HL_9H3G_054
- Geometric discrepancy: 0.0569
- The information below is about HL_9H3G_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.4
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
11HV|1|28|G|3873
11HV|1|28|G|3874
11HV|1|28|G|3875
11HV|1|28|A|3876
11HV|1|28|A|3877
11HV|1|28|C|3878
11HV|1|28|G|3879
11HV|1|28|G|3880
11HV|1|28|G|3881
11HV|1|28|C|3882
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 32
- Large ribosomal subunit protein eL32
- Chain L3
- 60S ribosomal protein L3
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