HL_11IQ_055
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAUGGAAGUCG
- Length
- 11 nucleotides
- Bulged bases
- 11IQ|1|28|A|1984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11IQ_055 not in the Motif Atlas
- Homologous match to HL_9AXU_025
- Geometric discrepancy: 0.3022
- The information below is about HL_9AXU_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11IQ|1|28|C|1978
11IQ|1|28|A|1979
11IQ|1|28|U|1980
11IQ|1|28|G|1981
11IQ|1|28|G|1982
11IQ|1|28|A|1983
11IQ|1|28|A|1984
11IQ|1|28|G|1985
11IQ|1|28|U|1986
11IQ|1|28|C|1987
11IQ|1|28|G|1988
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain t
- uL11
- Chain v
- Elongation factor 2
Coloring options: