HL_1FFK_044
3D structure
- PDB id
- 1FFK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- UCUAGUAACAA
- Length
- 11 nucleotides
- Bulged bases
- 1FFK|1|0|A|1836, 1FFK|1|0|G|1837, 1FFK|1|0|U|1838, 1FFK|1|0|A|1842
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1FFK_044 not in the Motif Atlas
- Homologous match to HL_4V9F_047
- Geometric discrepancy: 0.0516
- The information below is about HL_4V9F_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
1FFK|1|0|U|1833
1FFK|1|0|C|1834
1FFK|1|0|U|1835
1FFK|1|0|A|1836
1FFK|1|0|G|1837
1FFK|1|0|U|1838
1FFK|1|0|A|1839
1FFK|1|0|A|1840
1FFK|1|0|C|1841
1FFK|1|0|A|1842
1FFK|1|0|A|1843
Current chains
- Chain 0
- 23S RRNA
Nearby chains
- Chain A
- RIBOSOMAL PROTEIN L2
- Chain X
- RIBOSOMAL PROTEIN L37E
Coloring options: