3D structure

PDB id
1HR0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
1HR0|1|A|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_1HR0_017 not in the Motif Atlas
Homologous match to HL_4LFB_017
Geometric discrepancy: 0.0666
The information below is about HL_4LFB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

1HR0|1|A|G|786
1HR0|1|A|A|787
1HR0|1|A|U|788
1HR0|1|A|U|789
1HR0|1|A|A|790
1HR0|1|A|G|791
1HR0|1|A|A|792
1HR0|1|A|U|793
1HR0|1|A|A|794
1HR0|1|A|C|795
1HR0|1|A|C|796

Current chains

Chain A
16S RIBOSOMAL RNA

Nearby chains

Chain K
30S RIBOSOMAL PROTEIN S11
Chain X
FRAGMENT OF MESSENGER RNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1631 s