HL_1M5O_003
3D structure
- PDB id
- 1M5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Transition State Stabilization by a Catalytic RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.2 Å
Loop
- Sequence
- CAUUGCACUCCG
- Length
- 12 nucleotides
- Bulged bases
- 1M5O|1|E|C|40
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_15603.2
- Basepair signature
- cWW-R-R-R-R-R-R-R-R-R
- Number of instances in this motif group
- 9
Unit IDs
1M5O|1|E|C|35
1M5O|1|E|A|36
1M5O|1|E|U|37
1M5O|1|E|U|38
1M5O|1|E|G|39
1M5O|1|E|C|40
1M5O|1|E|A|41
1M5O|1|E|C|42
1M5O|1|E|U|43
1M5O|1|E|C|44
1M5O|1|E|C|45
1M5O|1|E|G|46
Current chains
- Chain E
- RNA HAIRPIN RIBOZYME
Nearby chains
- Chain F
- U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
Coloring options: