HL_1N34_021
3D structure
- PDB id
- 1N34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 1N34|1|A|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1N34_021 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.4385
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
1N34|1|A|G|963
1N34|1|A|A|964
1N34|1|A|A|965
1N34|1|A|G|966
1N34|1|A|C|967
1N34|1|A|A|968
1N34|1|A|A|969
1N34|1|A|C|970
1N34|1|A|G|971
1N34|1|A|C|972
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain M
- 30S RIBOSOMAL PROTEIN S13
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