HL_1N78_001

3D structure

PDB id

1N78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(Glu) and glutamol-AMP.

Experimental method

X-RAY DIFFRACTION

Resolution

2.1 Å

Loop

Sequence

UAGCGGUUAG

Length

10 nucleotides

Bulged bases

1N78|1|C|C|516, 1N78|1|C|G|518, 1N78|1|C|G|519, 1N78|1|C|U|520|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78347.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

1N78|1|C|U|513
1N78|1|C|A|514
1N78|1|C|G|515
1N78|1|C|C|516
1N78|1|C|G|518
1N78|1|C|G|519
1N78|1|C|U|520
1N78|1|C|U|520|||A
1N78|1|C|A|521
1N78|1|C|G|522

Current chains

Chain C

tRNA(Glu)

Nearby chains

Chain A

Glutamyl-tRNA synthetase