HL_1NWY_027
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUAGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 1NWY|1|0|A|1081, 1NWY|1|0|G|1082, 1NWY|1|0|C|1083
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1NWY_027 not in the Motif Atlas
- Homologous match to HL_6PRV_001
- Geometric discrepancy: 0.4373
- The information below is about HL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
1NWY|1|0|C|1075
1NWY|1|0|U|1076
1NWY|1|0|U|1077
1NWY|1|0|A|1078
1NWY|1|0|G|1079
1NWY|1|0|A|1080
1NWY|1|0|A|1081
1NWY|1|0|G|1082
1NWY|1|0|C|1083
1NWY|1|0|A|1084
1NWY|1|0|G|1085
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain G
- ribosomal protein L11
- Chain T
- general stress protein Ctc
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