HL_1NWY_039

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UCAAUG

Length

6 nucleotides

Bulged bases

1NWY|1|0|U|1651

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_039 not in the Motif Atlas

Homologous match to HL_7RQB_041

Geometric discrepancy: 0.2592

The information below is about HL_7RQB_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01057.2

Basepair signature

cWW

Number of instances in this motif group

5

Unit IDs

1NWY|1|0|U|1647
1NWY|1|0|C|1648
1NWY|1|0|A|1649
1NWY|1|0|A|1650
1NWY|1|0|U|1651
1NWY|1|0|G|1652

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains