HL_1NWY_047

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

1NWY|1|0|U|1938

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_047 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.2147

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33350.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

1NWY|1|0|G|1932
1NWY|1|0|G|1933
1NWY|1|0|U|1934
1NWY|1|0|A|1935
1NWY|1|0|A|1936
1NWY|1|0|G|1937
1NWY|1|0|U|1938
1NWY|1|0|U|1939
1NWY|1|0|C|1940

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain I

ribosomal protein L14