HL_1NWY_071

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

ACUGACACGU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1NWY_071 not in the Motif Atlas

Geometric match to HL_5J7L_212

Geometric discrepancy: 0.3249

The information below is about HL_5J7L_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

1NWY|1|0|A|2333
1NWY|1|0|C|2334
1NWY|1|0|U|2335
1NWY|1|0|G|2336
1NWY|1|0|A|2337
1NWY|1|0|C|2338
1NWY|1|0|A|2339
1NWY|1|0|C|2340
1NWY|1|0|G|2341
1NWY|1|0|U|2342

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain 3

ribosomal protein L35

Chain J

ribosomal protein L15

Chain U

ribosomal protein L27