HL_1SM1_044
3D structure
- PDB id
- 1SM1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.42 Å
Loop
- Sequence
- GUUUACCAAAAUC
- Length
- 13 nucleotides
- Bulged bases
- 1SM1|1|0|A|1777
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_1SM1_044 not in the Motif Atlas
- Homologous match to HL_7A0S_045
- Geometric discrepancy: 0.3332
- The information below is about HL_7A0S_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_60266.1
- Basepair signature
- cWW-cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
1SM1|1|0|G|1767
1SM1|1|0|U|1768
1SM1|1|0|U|1769
1SM1|1|0|U|1770
1SM1|1|0|A|1771
1SM1|1|0|C|1772
1SM1|1|0|C|1773
1SM1|1|0|A|1774
1SM1|1|0|A|1775
1SM1|1|0|A|1776
1SM1|1|0|A|1777
1SM1|1|0|U|1778
1SM1|1|0|C|1779
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain 5
- QUINUPRISTIN
- Chain A
- 50S RIBOSOMAL PROTEIN L2
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