HL_1VWW_052

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

1VWW|1|5|A|4214, 1VWW|1|5|C|4221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48039.3

Basepair signature

cWW-R

Number of instances in this motif group

12

Unit IDs

1VWW|1|5|U|4210
1VWW|1|5|C|4211
1VWW|1|5|A|4212
1VWW|1|5|A|4213
1VWW|1|5|A|4214
1VWW|1|5|C|4215
1VWW|1|5|G|4216
1VWW|1|5|G|4217
1VWW|1|5|U|4218
1VWW|1|5|A|4219
1VWW|1|5|A|4220
1VWW|1|5|C|4221
1VWW|1|5|G|4222

Current chains

Chain 5

28S ribosomal RNA

Nearby chains