HL_1YJW_001

3D structure

PDB id

1YJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGCCAAGCUG

Length

10 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1YJW|1|0|U|55
1YJW|1|0|G|56
1YJW|1|0|C|57
1YJW|1|0|C|58
1YJW|1|0|A|59
1YJW|1|0|A|60
1YJW|1|0|G|61
1YJW|1|0|C|62
1YJW|1|0|U|63
1YJW|1|0|G|64

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 2

50S RIBOSOMAL PROTEIN L39E

Chain S

50S RIBOSOMAL PROTEIN L23P

Chain V

50S RIBOSOMAL PROTEIN L29P