HL_1YJW_007

3D structure

PDB id

1YJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGCAACG

Length

7 nucleotides

Bulged bases

1YJW|1|0|C|197, 1YJW|1|0|C|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1YJW_007 not in the Motif Atlas

Homologous match to HL_4V9F_007

Geometric discrepancy: 0.1122

The information below is about HL_4V9F_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81964.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

5

Unit IDs

1YJW|1|0|C|195
1YJW|1|0|G|196
1YJW|1|0|C|197
1YJW|1|0|A|198
1YJW|1|0|A|199
1YJW|1|0|C|200
1YJW|1|0|G|201

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain L

50S RIBOSOMAL PROTEIN L15P

Chain M

50S RIBOSOMAL PROTEIN L15E