HL_1Z58_006

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

1Z58|1|2|A|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_006 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.2122

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

24

Unit IDs

1Z58|1|2|G|171
1Z58|1|2|A|172
1Z58|1|2|A|173
1Z58|1|2|A|174
1Z58|1|2|C|175
1Z58|1|2|A|176
1Z58|1|2|U|177
1Z58|1|2|C|178

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains