HL_1Z58_007

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GAGAAUUC

Length

8 nucleotides

Bulged bases

1Z58|1|2|U|206

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_007 not in the Motif Atlas

Homologous match to HL_5J7L_140

Geometric discrepancy: 0.5974

The information below is about HL_5J7L_140

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62934.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

2

Unit IDs

1Z58|1|2|G|201
1Z58|1|2|A|202
1Z58|1|2|G|203
1Z58|1|2|A|204
1Z58|1|2|A|205
1Z58|1|2|U|206
1Z58|1|2|U|207
1Z58|1|2|C|208

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains