HL_1Z58_023

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

AUUGAGGU

Length

8 nucleotides

Bulged bases

1Z58|1|2|U|840, 1Z58|1|2|G|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_023 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.3758

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

1Z58|1|2|A|838
1Z58|1|2|U|839
1Z58|1|2|U|840
1Z58|1|2|G|841
1Z58|1|2|A|842
1Z58|1|2|G|843
1Z58|1|2|G|844
1Z58|1|2|U|845

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains