HL_1Z58_030

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUGAGAAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_030 not in the Motif Atlas

Homologous match to HL_7RQB_033

Geometric discrepancy: 0.2011

The information below is about HL_7RQB_033

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

1Z58|1|2|G|1294
1Z58|1|2|U|1295
1Z58|1|2|G|1296
1Z58|1|2|A|1297
1Z58|1|2|G|1298
1Z58|1|2|A|1299
1Z58|1|2|A|1300
1Z58|1|2|U|1301
1Z58|1|2|C|1302

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains