HL_1Z58_031

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGGUCGUCC

Length

9 nucleotides

Bulged bases

1Z58|1|2|G|1338, 1Z58|1|2|U|1342

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_031 not in the Motif Atlas

Geometric match to HL_7A0S_041

Geometric discrepancy: 0.3447

The information below is about HL_7A0S_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_07145.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

1Z58|1|2|G|1336
1Z58|1|2|G|1337
1Z58|1|2|G|1338
1Z58|1|2|U|1339
1Z58|1|2|C|1340
1Z58|1|2|G|1341
1Z58|1|2|U|1342
1Z58|1|2|C|1343
1Z58|1|2|C|1344

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains