HL_1Z58_041

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUUUACCAAAAUC

Length

13 nucleotides

Bulged bases

1Z58|1|2|C|1773, 1Z58|1|2|A|1775, 1Z58|1|2|A|1777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_041 not in the Motif Atlas

Homologous match to HL_7A0S_045

Geometric discrepancy: 0.3012

The information below is about HL_7A0S_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50951.2

Basepair signature

cWW-F-F-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

1Z58|1|2|G|1767
1Z58|1|2|U|1768
1Z58|1|2|U|1769
1Z58|1|2|U|1770
1Z58|1|2|A|1771
1Z58|1|2|C|1772
1Z58|1|2|C|1773
1Z58|1|2|A|1774
1Z58|1|2|A|1775
1Z58|1|2|A|1776
1Z58|1|2|A|1777
1Z58|1|2|U|1778
1Z58|1|2|C|1779

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains