HL_1Z58_044

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_044 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3981

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

1Z58|1|2|G|1893
1Z58|1|2|U|1894
1Z58|1|2|A|1895
1Z58|1|2|A|1896
1Z58|1|2|C|1897
1Z58|1|2|U|1898
1Z58|1|2|A|1899
1Z58|1|2|U|1900
1Z58|1|2|A|1901
1Z58|1|2|A|1902
1Z58|1|2|C|1903

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains