HL_1Z58_055

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

1Z58|1|2|U|2385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_1Z58_055 not in the Motif Atlas

Homologous match to HL_7A0S_058

Geometric discrepancy: 0.2357

The information below is about HL_7A0S_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

1Z58|1|2|C|2383
1Z58|1|2|G|2384
1Z58|1|2|U|2385
1Z58|1|2|G|2386
1Z58|1|2|U|2387
1Z58|1|2|G|2388
1Z58|1|2|G|2389
1Z58|1|2|A|2390
1Z58|1|2|A|2391
1Z58|1|2|G|2392

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains